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Welcome to the Memory and Development (MaD) Lab at Florida International University's wiki. This wiki is to provide research assistants with important information to make working in the lab go smoothly.

Administrative Information

• New Research Assistant Instructions
• Room Reservations
• Sona Instructions
• IRB Protocols
• Lab Equipment

Steps for MRI Data Analysis

• Moving DICOMs to HPC
• DICOM Conversion
• Freesurfer Recon_All, Quality Assurance, and Resubmission
• Preprocessing
• Normalization To Be Completed
• First Level Analysis To Be Completed
• Second Level Analysis To Be Completed
• Group Level Analysis To Be Completed

Additional Data Analyses

• Creating ROI Masks in AFNI

Useful Information

• LSF Scheduler, Jobs, and Queues
• Open Remote Jupyter Notebook
• R Statistical Programming Language
• Setting up Miniconda Environments
• Creating a New Github Repository
• Adding Files to a Github Repository
• Syncing a Github Fork

Current Projects

• CMIND
• EMU
• WMAZE
• LOSSAVER
• SEQTRD
• TOLERANCE