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robertoostenveld committed Dec 9, 2024
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6 changes: 3 additions & 3 deletions _data/tag/artifact.yml
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- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/dss_ecg

- name: How to incorporate head movements in MEG analysis
link: /example/headmovement_meg

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- name: Combine MEG with Eyelink eyetracker data
link: /example/meg_eyelink

- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts

- name: How can I interpret the different types of padding in FieldTrip?
link: /faq/artifact_padding

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8 changes: 4 additions & 4 deletions _data/tag/cluster.yml
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- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA
link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa

- name: Computing and reporting the effect size
link: /example/effectsize

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link: /example/samplesize

- name: Use simulated ERPs to explore cluster statistics
link: /example/use_simulated_erps_to_explore_cluster_statistics
link: /example/simulateddata_clusterstats

- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA
link: /example/stats_besa

- name: Why should I use the cfg.correcttail option when using statistics_montecarlo?
link: /faq/clusterstats_correcttail
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4 changes: 2 additions & 2 deletions _data/tag/coherence.yml
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link: /example/coherence_snr

- name: Correlation analysis of fMRI data
link: /example/correlation_analysis_in_fmri_data
link: /example/fmri_correlationanalysis

- name: What is the difference between coherence and coherency?
link: /faq/coherence_coherency
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link: /faq/phaseslopeindex

- name: References to implemented methods
link: /references_to_implemented_methods
link: /references_methods

- name: Localizing visual gamma and cortico-muscular coherence using DICS
link: /tutorial/beamformingextended
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2 changes: 1 addition & 1 deletion _data/tag/connectivity.yml
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link: /development/module/connectivity

- name: Conditional Granger causality in the frequency domain
link: /example/connectivity_conditional_granger
link: /example/granger_conditional

- name: In what way can frequency domain data be represented in FieldTrip?
link: /faq/datatype_freq
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6 changes: 3 additions & 3 deletions _data/tag/ct.yml
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- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/dss_ecg

- name: How to incorporate head movements in MEG analysis
link: /example/headmovement_meg

Expand All @@ -10,9 +13,6 @@
- name: Combine MEG with Eyelink eyetracker data
link: /example/meg_eyelink

- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts

- name: How can I interpret the different types of padding in FieldTrip?
link: /faq/artifact_padding

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2 changes: 1 addition & 1 deletion _data/tag/ctf.yml
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link: /example/megrealign

- name: Can I create an artificial CTF dataset using MATLAB?
link: /example/writing_simulated_data_to_a_ctf_dataset
link: /example/simulateddata_ctf

- name: How can I convert an anatomical MRI from DICOM into CTF format?
link: /faq/anat_dicom2ctf
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2 changes: 1 addition & 1 deletion _data/tag/dataformat.yml
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link: /example/biosemi

- name: Can I create an artificial CTF dataset using MATLAB?
link: /example/writing_simulated_data_to_a_ctf_dataset
link: /example/simulateddata_ctf

- name: How can I convert an anatomical MRI from DICOM into CTF format?
link: /faq/anat_dicom2ctf
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18 changes: 9 additions & 9 deletions _data/tag/dipole.yml
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- name: Compute forward simulated data using ft_dipolesimulation
link: /example/compute_forward_simulated_data

- name: Compute forward simulated data and apply a beamformer scan
link: /example/compute_forward_simulated_data_and_apply_a_beamformer_scan

- name: Compute forward simulated data and apply a dipole fit
link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit

- name: Compute forward simulated data with the low-level ft_compute_leadfield
link: /example/compute_leadfield

- name: Fit a dipole to the tactile ERF after mechanical stimulation
link: /example/dipolefit_somatosensory_erf

- name: Compute forward simulated data using ft_dipolesimulation
link: /example/simulateddata

- name: Compute forward simulated data and apply a beamformer scan
link: /example/simulateddata_beamformer

- name: Compute forward simulated data and apply a dipole fit
link: /example/simulateddata_dipolefit

- name: Dipole fitting of combined MEG/EEG data
link: /workshop/natmeg2014/dipolefitting

34 changes: 17 additions & 17 deletions _data/tag/eeg.yml
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- name: Streaming realtime data from Modular EEG (aka OpenEEG)
link: /development/realtime/modulareeg

- name: Example analysis pipeline for Biosemi data
link: /example/biosemi

- name: Combined EEG and MEG source reconstruction
link: /example/combined_eeg_and_meg_source_reconstruction
- name: Use your own forward leadfield model in an inverse beamformer computation
link: /example/beamformer_ownforward

- name: Compute forward simulated data using ft_dipolesimulation
link: /example/compute_forward_simulated_data
- name: Testing BEM created EEG lead fields
link: /example/bem_evaluation

- name: Compute forward simulated data and apply a dipole fit
link: /example/compute_forward_simulated_data_and_apply_a_dipole_fit
- name: Example analysis pipeline for Biosemi data
link: /example/biosemi

- name: Compute forward simulated data with the low-level ft_compute_leadfield
link: /example/compute_leadfield
Expand All @@ -25,23 +22,26 @@
- name: Compute EEG leadfields using a FEM headmodel
link: /example/fem

- name: Getting started with reading raw EEG or MEG data
link: /example/getting_started_with_reading_raw_eeg_or_meg_data

- name: Using General Linear Modeling on time series data
link: /example/glm_timeseries

- name: Using General Linear Modeling over trials
link: /example/glm_trials

- name: Getting started with reading raw EEG or MEG data
link: /example/raw_meeg

- name: Re-reference EEG and iEEG data
link: /example/rereference

- name: Testing BEM created EEG lead fields
link: /example/testing_bem_created_leadfields
- name: Compute forward simulated data using ft_dipolesimulation
link: /example/simulateddata

- name: Use your own forward leadfield model in an inverse beamformer computation
link: /example/use_your_own_forward_leadfield_model_in_an_inverse_beamformer_computation
- name: Compute forward simulated data and apply a dipole fit
link: /example/simulateddata_dipolefit

- name: Combined EEG and MEG source reconstruction
link: /example/sourcerecon_meeg

- name: Making a synchronous movie of EEG or NIRS combined with video recordings
link: /example/video_eeg
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link: /reading_data

- name: References to implemented methods
link: /references_to_implemented_methods
link: /references_methods

- name: Template 2-D layouts for plotting
link: /template/layout
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2 changes: 1 addition & 1 deletion _data/tag/emg.yml
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link: /example/bids_emg

- name: Detect the muscle activity in an EMG channel and use that as trial definition
link: /example/detect_the_muscle_activity_in_an_emg_channel_and_use_that_as_trial_definition
link: /example/trialdef_emg

- name: Analysis of corticomuscular coherence
link: /tutorial/coherence
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2 changes: 1 addition & 1 deletion _data/tag/filter.yml
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- name: Determine the filter characteristics
link: /example/determine_the_filter_characteristics
link: /example/filter_characteristics

- name: How can I interpret the different types of padding in FieldTrip?
link: /faq/artifact_padding
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2 changes: 1 addition & 1 deletion _data/tag/fixme.yml
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Expand Up @@ -2,7 +2,7 @@
link: /development/guideline/code

- name: Common filters in beamforming
link: /example/common_filters_in_beamforming
link: /example/beamformer_commonfilter

- name: Fit a dipole to the tactile ERF after mechanical stimulation
link: /example/dipolefit_somatosensory_erf
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2 changes: 1 addition & 1 deletion _data/tag/fmri.yml
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Expand Up @@ -2,7 +2,7 @@
link: /development/realtime/fmri

- name: Correlation analysis of fMRI data
link: /example/correlation_analysis_in_fmri_data
link: /example/fmri_correlationanalysis

- name: Getting started with fMRI timeseries data
link: /getting_started/fmri
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24 changes: 12 additions & 12 deletions _data/tag/freq.yml
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- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA
link: /example/apply_clusterrandanalysis_on_tfrs_of_power_that_were_computed_with_besa
- name: Common filters in beamforming
link: /example/beamformer_commonfilter

- name: Effect of SNR on Coherence
link: /example/coherence_snr

- name: Common filters in beamforming
link: /example/common_filters_in_beamforming

- name: Conditional Granger causality in the frequency domain
link: /example/connectivity_conditional_granger

- name: Correlation analysis of fMRI data
link: /example/correlation_analysis_in_fmri_data

- name: Cross-frequency analysis
link: /example/crossfreq

- name: Effects of tapering for power estimates
link: /example/effects_of_tapering

- name: Correlation analysis of fMRI data
link: /example/fmri_correlationanalysis

- name: Conditional Granger causality in the frequency domain
link: /example/granger_conditional

- name: Simulate an oscillatory signal with phase resetting
link: /example/phase_reset

- name: Analyze Steady-State Visual Evoked Potentials (SSVEPs)
link: /example/ssvep

- name: Apply non-parametric statistics with clustering on TFRs of power that were computed with BESA
link: /example/stats_besa

- name: How can I test whether a behavioral measure is phasic?
link: /faq/behavior_cosinefit

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link: /reference

- name: References to implemented methods
link: /references_to_implemented_methods
link: /references_methods

- name: Localizing oscillatory sources using beamformer techniques
link: /tutorial/beamformer
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2 changes: 1 addition & 1 deletion _data/tag/granger.yml
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- name: Conditional Granger causality in the frequency domain
link: /example/connectivity_conditional_granger
link: /example/granger_conditional

- name: Analysis of sensor- and source-level connectivity
link: /tutorial/connectivity
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20 changes: 10 additions & 10 deletions _data/tag/headmodel.yml
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- name: Combined EEG and MEG source reconstruction
link: /example/combined_eeg_and_meg_source_reconstruction

- name: Compute forward simulated data using ft_dipolesimulation
link: /example/compute_forward_simulated_data
- name: Testing BEM created EEG lead fields
link: /example/bem_evaluation

- name: Compute forward simulated data with the low-level ft_compute_leadfield
link: /example/compute_leadfield
Expand All @@ -14,17 +11,20 @@
link: /example/fem

- name: Make MEG leadfields using different headmodels
link: /example/make_leadfields_using_different_headmodels
link: /example/headmodel_various

- name: Compute forward simulated data using ft_dipolesimulation
link: /example/simulateddata

- name: Create MNI-aligned grids in individual head-space
link: /example/sourcemodel_aligned2mni

- name: Combined EEG and MEG source reconstruction
link: /example/sourcerecon_meeg

- name: Fitting a template MRI to the MEG Polhemus head shape
link: /example/sphere_fitting

- name: Testing BEM created EEG lead fields
link: /example/testing_bem_created_leadfields

- name: How to coregister an anatomical MRI with the gradiometer or electrode positions?
link: /faq/anat_coreg

Expand Down Expand Up @@ -83,7 +83,7 @@
link: /reference

- name: References to implemented methods
link: /references_to_implemented_methods
link: /references_methods

- name: Template head models for EEG volume conduction modeling
link: /template/headmodel
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6 changes: 3 additions & 3 deletions _data/tag/ica.yml
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- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/dss_ecg

- name: Independent component analysis (ICA) to remove ECG artifacts
link: /example/ica_ecg

- name: Independent component analysis (ICA) to remove EOG artifacts
link: /example/ica_eog

- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts

- name: The databrowser crashes and destroys the whole MATLAB session, how can I resolve this?
link: /faq/databrowser_crash

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4 changes: 2 additions & 2 deletions _data/tag/literature.yml
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link: /citations

- name: References to implemented methods
link: /references_to_implemented_methods
link: /references_methods

- name: References to review papers and teaching material
link: /references_to_review_papers_and_teaching_material
link: /references_papers

6 changes: 3 additions & 3 deletions _data/tag/meg-removal.yml
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- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/dss_ecg

- name: Independent component analysis (ICA) to remove ECG artifacts
link: /example/ica_ecg

- name: Use denoising source separation (DSS) to remove ECG artifacts
link: /example/use_denoising_source_separation_dss_to_remove_ecg_artifacts

- name: Which datasets are used in the documentation and where are they used?
link: /faq/datasets

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