Skip to content

epiforecasts/nowcasting.example

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

28 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Nowcasting examples

This repository contains two example approaches to nowcasting, one using the EpiNow2 package, and one using the epinowcast package which is currently being developed to eventually replace EpiNow2 for real-time applications.

Installation

You can install the utility functions contained in this repo with

# install.packages("devtools")
devtools::install_github("epiforecasts/nowcasting.example")

Render the EpiNow2 report

To render the report, run

rmarkdown::render("inst/reports/epinow2.Rmd")

Afterwards the report can be viewed in inst/reports/epinow2.html. A rendered version of the report is also available in the repository.

Render the epinowcast report

To render the report, run

rmarkdown::render("inst/reports/epinowcast.Rmd")

Afterwards the report can be viewed in inst/reports/epinowcast.html. A rendered version of the report is also available in the repository.

Create mock dataset

A mock dataset can be created using

source("inst/scripts/create_mock_dataset.r")

About

Estimate reporting delays and use them for nowcasting

Resources

License

Code of conduct

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages