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Merge branch 'version-bump' into 'dev'
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simplify changelog and bump version to v1.1.0

See merge request epi2melabs/workflows/wf-amplicon!86
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julibeg committed Jun 4, 2024
2 parents 712917e + db57dec commit dde231d
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7 changes: 2 additions & 5 deletions CHANGELOG.md
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Expand Up @@ -4,17 +4,14 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [unreleased]
## [v1.1.0]
### Fixed
- The `miniasm` process requesting too little memory in some cases.
- Spurious out-of-memory errors for the SPOA process.
- Variant calling mode with `--combine_results` failing with a single sample/barcode.

### Changed
- Only define different colours for the individual samples in the per-amplicon depth plots when necessary (i.e. when there is at least one amplicon depth plot that shows more than one sample).

### Changed
- The depth plot in the report now uses consistent colours for individual samples across the different amplicons.
- When there is at least one amplicon depth plot that shows more than one sample, the depth plots now use consistent colours for individual samples across the different amplicons.
- The workflow now uses the `fastcat` read length and quality histograms instead of the per-read stats in the report process.

### Added
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -77,7 +77,7 @@ manifest {
description = 'Amplicon workflow'
mainScript = 'main.nf'
nextflowVersion = '>=23.04.2'
version = 'v1.0.4'
version = 'v1.1.0'
}

epi2melabs {
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