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Merge branch 'bump-for-tag' into 'dev'
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bump version and fix changelog

See merge request epi2melabs/workflows/wf-amplicon!45
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julibeg committed Nov 6, 2023
2 parents 842e4ed + ffb8bfe commit a61857c
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8 changes: 4 additions & 4 deletions CHANGELOG.md
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Expand Up @@ -4,10 +4,13 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [unreleased]
## [v0.5.0]
### Changed
- Names of barcoded directories in the sample sheet now need to be of format `barcodeXY`.

### Added
- Support for specifying reference sequences for individual samples with an extra `"ref"` column in the sample sheet.

## [v0.4.1]
### Changed
- The workflow now also emits VCF index files as well as BAM / VCF index files for combined outputs when running with `--combine_results`.
Expand All @@ -19,9 +22,6 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Removed
- Misleading allelic balance statistic in report.

### Added
- Support for specifying reference sequences for individual samples with an extra `"ref"` column in the sample sheet.

## [v0.4.0]
### Added
- Running the workflow without a reference will switch the workflow to "no-reference mode" and will use SPOA to construct a consensus sequence _de novo_.
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -71,7 +71,7 @@ manifest {
description = 'Amplicon workflow'
mainScript = 'main.nf'
nextflowVersion = '>=23.04.2'
version = 'v0.4.1'
version = 'v0.5.0'
}

epi2melabs {
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