Completed the properOverlaps relations and inverse #241
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| name: Update GitHub Pages | |
| on: | |
| push: | |
| branches: | |
| - '[0-9]+.[0-9]+.[0-9]+' | |
| - '[0-9]+.[0-9]+.[0-9]+-*' | |
| - cd_update_pages | |
| env: | |
| GIT_USER_NAME: EMMO Developers | |
| GIT_USER_EMAIL: "[email protected]" | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Debug info | |
| run: | | |
| echo "GITHUB_REF_NAME=${GITHUB_REF_NAME}" | |
| - name: Setup Python 3.11 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.11 | |
| - name: Install ROBOT | |
| run: | | |
| mkdir bin | |
| wget -nv https://github.com/ontodev/robot/releases/download/v1.9.6/robot.jar | |
| mv robot.jar bin/. | |
| curl https://raw.githubusercontent.com/ontodev/robot/master/bin/robot > bin/robot | |
| chmod +x bin/robot | |
| ls -l bin/ | |
| - name: Install dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install sphinx sphinxcontrib-globalsubs sphinx_design nbsphinx pydata-sphinx-theme | |
| #pip install git+https://github.com/emmo-repo/EMMOntoPy.git@master | |
| pip install git+https://github.com/emmo-repo/EMMOntoPy.git@fix-rename-iris | |
| - name: Create and prepare build and public directories | |
| run: | | |
| mkdir build public | |
| if [ -d doc/_static ]; then cp -rf doc/_static/* build/. ; fi | |
| - name: Create ontologies for publishing | |
| run: | | |
| ontoconvert -sawe --base-iri="https://w3id.org/emmo#" --iri=https://w3id.org/emmo emmo.ttl public/emmo.ttl | |
| ontoconvert -sawe --base-iri="https://w3id.org/emmo#" --iri=https://w3id.org/emmo emmo-full.ttl public/emmo-full.ttl | |
| #ontoconvert --reasoner=Pellet public/emmo.ttl public/emmo-inferred.ttl | |
| #ontoconvert --reasoner=Pellet public/emmo-full.ttl public/emmo-full-inferred.ttl | |
| #bin/robot reason --reasoner ELK --input public/emmo.ttl --output public/emmo-inferred.ttl | |
| #bin/robot reason --reasoner ELK --input public/emmo-full.ttl --output public/emmo-full-inferred.ttl | |
| bin/robot reason --reasoner HermiT --input public/emmo.ttl --output public/emmo-inferred.ttl | |
| bin/robot reason --reasoner JFact --input public/emmo-full.ttl --output public/emmo-full-inferred.ttl | |
| ontoconvert public/emmo.ttl public/emmo.owl | |
| ontoconvert public/emmo-full.ttl public/emmo-full.owl | |
| ontoconvert public/emmo-inferred.ttl public/emmo-inferred.owl | |
| ontoconvert public/emmo-full-inferred.ttl public/emmo-full-inferred.owl | |
| ontoconvert --rename-iris -- public/emmo.ttl public/emmo-for-humans.ttl | |
| - name: Generate html documentation (based on emmo-full) | |
| run: | | |
| #ontodoc --iri-regex=https://w3id.org/emmo --imported public/emmo-full-inferred.ttl build/emmo.rst | |
| ontodoc --iri-regex=https://w3id.org/emmo --imported emmo-full.ttl build/emmo.rst | |
| sphinx-build "build/" "public/" | |
| - name: Checkout GitHub Pages for EMMO-repo | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: emmo-repo/emmo-repo.github.io | |
| path: pages | |
| ssh-key: ${{ secrets.SSH_PRIVATE_KEY }} | |
| ssh-strict: no | |
| - name: Copy to GitHub Pages | |
| run: | | |
| # Do not overwrite index.html | |
| rm public/index.html | |
| # Tell GitHub that this site is not generated with jekyll | |
| touch public/.nojekyll | |
| # Copy to latest (root) | |
| cp -rf public/* pages/. | |
| # Copy to version | |
| VERSION=$(git rev-parse --abbrev-ref HEAD) | |
| if [ ! -d pages/versions/${VERSION} ]; then \ | |
| mkdir pages/versions/${VERSION} | |
| fi | |
| cp -rf public/* pages/versions/${VERSION}/. | |
| # Domain repositories can use peaceiris/actions-gh-pages@v3. | |
| # However, since EMMO for historical reasons uses a separate repo | |
| # for its GitHub Pages, it is easier to use git directly. | |
| - name: Push to GitHub Pages | |
| run: | | |
| cd pages | |
| git config --global user.email "[email protected]" | |
| git config --global user.name "EMMO Developer" | |
| git add --all | |
| if [ -n "$(git status --porcelain -uno)" ]; then \ | |
| git commit -m 'Updated releasetable'; \ | |
| git pull origin master; \ | |
| git push origin master; \ | |
| fi | |
| #- name: Publish | |
| # uses: peaceiris/actions-gh-pages@v3 | |
| # if: github.ref == 'refs/heads/master' | |
| # with: | |
| # github_token: ${{ secrets.GITHUB_TOKEN }} | |
| # publish_dir: ./public | |
| # #keep_files: true | |
| # #external_repository: emmo-repo emmo-repo.github.io | |
| # | |
| # #publish_branch: master | |
| # #force_orphan: true | |
| # - name: Install pandoc 2.1.2 | |
| # run: | | |
| # #sudo apt-get install pandoc # we need v2.1.2 | |
| # wget https://github.com/jgm/pandoc/releases/download/2.1.2/pandoc-2.1.2-1-amd64.deb | |
| # sudo apt-get install ./pandoc-2.1.2-1-amd64.deb | |
| # | |
| # - name: Install other dependencies | |
| # run: | | |
| # sudo apt-get install graphviz | |
| # sudo apt-get install texlive-xetex | |
| # sudo apt-get install texlive-latex-extra | |
| # pip install semver | |
| # | |
| # - name: Checkout GitHub Pages for EMMO-repo | |
| # uses: actions/checkout@v4 | |
| # with: | |
| # repository: emmo-repo/emmo-repo.github.io | |
| # path: ".github/pages" | |
| # ssh-key: ${{ secrets.SSH_PRIVATE_KEY }} | |
| # ssh-strict: no | |
| # | |
| # - name: Update GitHub Pages | |
| # run: | | |
| # .github/scripts/update_pages.sh -v -V ${GITHUB_REF_NAME} |