Merge branch 'viash-hub:main' into main #89

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Job	Run time
run_ci_check_job	3s
list	34s
viash_test (gffread/gffread, src/gffread/config.vsh.yaml, src/gffread/)	2m 3s
viash_test (/featurecounts, src/featurecounts/config.vsh.yaml, src/featurecounts/)	2m 28s
viash_test (salmon/salmon_quant, src/salmon/salmon_quant/config.vsh.yaml, src/salmon/salmon_quant/)	2m 15s
viash_test (salmon/salmon_index, src/salmon/salmon_index/config.vsh.yaml, src/salmon/salmon_index/)	41s
viash_test (lofreq/lofreq_indelqual, src/lofreq/indelqual/config.vsh.yaml, src/lofreq/indelqual/)	1m 8s
viash_test (lofreq/lofreq_call, src/lofreq/call/config.vsh.yaml, src/lofreq/call/)	39s
viash_test (/fastp, src/fastp/config.vsh.yaml, src/fastp/)	35s
viash_test (/pear, src/pear/config.vsh.yaml, src/pear/)	1m 13s
viash_test (/arriba, src/arriba/config.vsh.yaml, src/arriba/)	2m 35s
viash_test (samtools/samtools_idxstats, src/samtools/samtools_idxstats/config.vsh.yaml, src/samto...	1m 54s
viash_test (samtools/samtools_sort, src/samtools/samtools_sort/config.vsh.yaml, src/samtools/samt...	34s
viash_test (samtools/samtools_stats, src/samtools/samtools_stats/config.vsh.yaml, src/samtools/sa...	1m 54s
viash_test (samtools/samtools_flagstat, src/samtools/samtools_flagstat/config.vsh.yaml, src/samto...	1m 18s
viash_test (samtools/samtools_index, src/samtools/samtools_index/config.vsh.yaml, src/samtools/sa...	40s
viash_test (busco/busco_list_datasets, src/busco/busco_list_datasets/config.vsh.yaml, src/busco/b...	2m 42s
viash_test (busco/busco_run, src/busco/busco_run/config.vsh.yaml, src/busco/busco_run/)	7m 44s
viash_test (busco/busco_download_datasets, src/busco/busco_download_datasets/config.vsh.yaml, src...	2m 35s
viash_test (star/star_align_reads, src/star/star_align_reads/config.vsh.yaml, src/star/star_align...	5m 8s
viash_test (/bgzip, src/bgzip/config.vsh.yaml, src/bgzip/)	2m 27s
	41m 10s

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Merge branch 'viash-hub:main' into main #89

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Merge branch 'viash-hub:main' into main #89

Jobs

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Run time