bug fix #132
Merged
bug fix #132
Annotations
16 errors and 6 warnings
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Check
--- re-building ‘DrawingPhylogenies.Rnw’ using Sweave
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Check
processing vignette 'RandomTopologies.Rnw' failed with diagnostics:
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there is no package called ‘phangorn’
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Vignette re-building failed.
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Build process failed
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Process completed with exit code 1.
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Install dependencies
package ‘Matrix’ 1.2.18 was found, but >= 1.3 is required by ‘MatrixExtra’
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Install dependencies
package or namespace load failed for ‘lbfgsb3c’ in dyn.load(file, DLLpath = DLLpath, ...):
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Install dependencies
loading failed
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Install dependencies
package ‘rainbow’ required by ‘fds’ could not be found
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Install dependencies
package or namespace load failed for ‘ggplot2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies
package ‘ggplot2’ could not be loaded
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Install dependencies
package or namespace load failed for ‘ggplot2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies
package ‘ggplot2’ could not be loaded
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Install dependencies
package or namespace load failed for ‘ggplot2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies
package ‘ggplot2’ could not be loaded
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Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Check
unknown option ‘--no-bulid-vignettes’
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Upload check results
No files were found with the provided path: check. No artifacts will be uploaded.
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Install dependencies
dependencies ‘waldo’, ‘pkgdown’, ‘vdiffr’, ‘downlit’, ‘arrow’, ‘gtable’, ‘Hmisc’, ‘profvis’, ‘phangorn’, ‘rjson’, ‘rhub’, ‘XML’, ‘crew’, ‘Biobase’, ‘httr2’, ‘emmeans’, ‘ergm’, ‘gam’, ‘metafor’, ‘orcutt’, ‘survey’, ‘marray’, ‘affy’, ‘limma’, ‘DPQ’, ‘gsl’, ‘BiocParallel’, ‘nanoparquet’, ‘BiocVersion’, ‘BiocStyle’, ‘rms’, ‘MuMIn’, ‘RODBC’, ‘Matrix’, ‘Bergm’, ‘pbkrtest’, ‘rio’, ‘fastICA’, ‘randomForest’, ‘subselect’, ‘estimability’, ‘FNN’, ‘VGAM’, ‘graph’, ‘Rgraphviz’, ‘slider’, ‘spam’, ‘rgeoda’, ‘rnaturalearthhires’, ‘randomForestSRC’, ‘rasterVis’, ‘locfit’, ‘OpenStreetMap’, ‘starsdata’, ‘gdtools’, ‘psychotree’, ‘keras3’, ‘unmarked’, ‘subplex’, ‘actuar’, ‘SGP’, ‘taxize’, ‘logger’, ‘doconv’, ‘equatags’, ‘spDataLarge’, ‘piecewise [... truncated]
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