Merge pull request #111 from KlausVigo/master #154
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Install dependencies
dependencies ‘graph’, ‘Biostrings’, ‘seqLogo’, ‘MassSpecWavelet’, ‘Biobase’, ‘httpgd’, ‘BiocVersion’, ‘marray’, ‘affy’, ‘limma’, ‘rnaturalearthhires’, ‘starsdata’, ‘spDataLarge’, ‘Rcgmin’, ‘Rvmmin’, ‘Rgraphviz’, ‘ComplexHeatmap’, ‘cmdstanr’, ‘glmmADMB’, ‘snpStats’, ‘sylly.de’, ‘sylly.es’, ‘taxidata’, ‘M3C’, ‘lavaan.survey’, ‘INLA’, ‘globaltest’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘R2wd’, ‘RandomFields’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘ExactData’, ‘cairoDevice’, ‘RGtk2’, ‘SwarmSVM’, ‘RDCOMClient’, ‘Icens’, ‘sangerseqR’, ‘rhdf5’, ‘mixOmics’, ‘RTCGA.rnaseq’, ‘extraTrees’, ‘genefilter’, ‘sva’, ‘pageviews’, ‘IRanges’, ‘mosaicCalc’ are not available
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