Improve write.tree and write.nexus. #176
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5 errors and 12 warnings
revdepcheck Suggests, macOS, R release
# orthogene
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revdepcheck Suggests, macOS, R release
Process completed with exit code 1.
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revdepcheck Imports, macOS, R release
# genBaRcode
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revdepcheck Imports, macOS, R release
Process completed with exit code 1.
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revdepcheck Imports, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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revdepcheck Depends, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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revdepcheck Suggests, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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revdepcheck Depends, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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revdepcheck Depends, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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revdepcheck Depends, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available
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revdepcheck Suggests, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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revdepcheck Suggests, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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revdepcheck Suggests, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available
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revdepcheck Imports, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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revdepcheck Imports, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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revdepcheck Imports, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available
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revdep-Imports-results
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revdep-Suggests-results
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