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Improve write.tree and write.nexus. #176

Improve write.tree and write.nexus.

Improve write.tree and write.nexus. #176

Triggered via pull request November 10, 2024 11:44
Status Failure
Total duration 3h 9m 54s
Artifacts 2

revdepcheck.yml

on: pull_request
Matrix: mem-check
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5 errors and 12 warnings
revdepcheck Suggests, macOS, R release
# orthogene
revdepcheck Suggests, macOS, R release
Process completed with exit code 1.
revdepcheck Imports, macOS, R release
# genBaRcode
revdepcheck Imports, macOS, R release
Process completed with exit code 1.
revdepcheck Imports, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
revdepcheck Depends, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
revdepcheck Suggests, macOS, R release
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
revdepcheck Depends, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Depends, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Depends, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available
revdepcheck Suggests, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Suggests, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Suggests, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available
revdepcheck Imports, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Imports, macOS, R release
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Imports, macOS, R release
dependencies ‘Biostrings’, ‘MassSpecWavelet’, ‘Biobase’, ‘marray’, ‘affy’, ‘limma’, ‘BiocVersion’, ‘BiocStyle’, ‘snpStats’, ‘rgeoda’, ‘orcutt’, ‘rnaturalearthhires’, ‘starsdata’, ‘taxize’, ‘spDataLarge’, ‘subselect’, ‘graph’, ‘Rgraphviz’, ‘cmdstanr’, ‘glmmADMB’, ‘ComplexHeatmap’, ‘Vdgraph’, ‘INLA’, ‘globaltest’, ‘sylly.de’, ‘sylly.es’, ‘M3C’, ‘mvPot’, ‘taxidata’, ‘iwmm’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘ExactData’, ‘rtracklayer’, ‘GenomicRanges’, ‘IRanges’, ‘S4Vectors’, ‘RandomFields’, ‘cairoDevice’, ‘RGtk2’, ‘Icens’, ‘mlr3proba’, ‘rhdf5’, ‘RDCOMClient’, ‘genefilter’, ‘sva’, ‘mixOmics’, ‘loe’, ‘RTCGA.rnaseq’ are not available

Artifacts

Produced during runtime
Name Size
revdep-Imports-results
5.07 KB
revdep-Suggests-results
4.82 KB