get_homologues-est
·
526 commits
to master
since this release
This is release 12042016 (v2.0.14) of GET_HOMOLOGUES, which ships with a few fixes:
08042016: fixed logging of -c core/pan-genome sizes when using -M/-G
11042016: updated marfil_homology::flag_small_clusters
12042016: edited get_homologues-est.pl -M -c -t taxa so that initial core/pan size only considers clusters with occupancy >= min_taxa
12042016: marfil_homology::makeIsoform now prints taxon name to help detect problematic datasets or incomplete BLAST jobs
12042016: added option -a to plot_pancore_matrix.pl to generate snapshots of pangenome size simulations
PS:
13042016: added check so that initial core/pan size cannot be < 0 (get_homologues-est.pl)