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Merge pull request #19088 from WilleBell/20231027113027_new_pr_PICRUS…
…t2252 {bio}[foss/2022a] PICRUSt2 v2.5.2 w/ Python 3.10.4
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easybuild/easyconfigs/p/PICRUSt2/PICRUSt2-2.5.2-foss-2022a.eb
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easyblock = 'PythonBundle' | ||
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name = 'PICRUSt2' | ||
version = '2.5.2' | ||
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homepage = 'https://github.com/picrust/picrust2' | ||
description = """PICRUSt2 (Phylogenetic Investigation of Communities by | ||
Reconstruction of Unobserved States) is a software for predicting | ||
functional abundances based only on marker gene sequences.""" | ||
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toolchain = {'name': 'foss', 'version': '2022a'} | ||
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dependencies = [ | ||
('Python', '3.10.4'), | ||
('SciPy-bundle', '2022.05'), | ||
('h5py', '3.7.0'), | ||
('biom-format', '2.1.14'), | ||
] | ||
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use_pip = True | ||
sanity_pip_check = True | ||
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exts_list = [ | ||
('joblib', '1.3.1', { | ||
'checksums': ['1f937906df65329ba98013dc9692fe22a4c5e4a648112de500508b18a21b41e3'], | ||
}), | ||
(name, version, { | ||
'modulename': '%(namelower)s', | ||
'source_tmpl': 'v%(version)s.tar.gz', | ||
'source_urls': ['https://github.com/picrust/%(namelower)s/archive'], | ||
'checksums': ['a8c3832bf759233b52b41c56a0ffef72491e431fee347a7c05695596c76a1a4c'], | ||
}), | ||
] | ||
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postinstallcmds = [ | ||
"cp -a %(start_dir)s%(name)s/%(namelower)s-%(version)s/%(namelower)s/default_files" | ||
" %(installdir)s/lib/python%(pyshortver)s/site-packages/%(namelower)s/" | ||
] | ||
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sanity_check_commands = [ | ||
"python -c 'from picrust2.default import default_tables'" | ||
] | ||
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sanity_check_paths = { | ||
'files': ['bin/picrust2_pipeline.py'], | ||
'dirs': ['lib/python%(pyshortver)s/site-packages/picrust2/default_files'], | ||
} | ||
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moduleclass = 'bio' |