Skip to content

Commit

Permalink
Merge pull request #21271 from fizwit/20240827111226_new_pr_fastp0234
Browse files Browse the repository at this point in the history
update fastp
  • Loading branch information
smoors authored Aug 30, 2024
2 parents 0a1e521 + 4f9e20a commit 9c5ffc0
Showing 1 changed file with 38 additions and 0 deletions.
38 changes: 38 additions & 0 deletions easybuild/easyconfigs/f/fastp/fastp-0.23.4-GCC-13.2.0.eb
Original file line number Diff line number Diff line change
@@ -0,0 +1,38 @@
easyblock = 'ConfigureMake'

name = 'fastp'
version = '0.23.4'

homepage = 'https://github.com/OpenGene/fastp'
description = """A tool designed to provide fast all-in-one preprocessing for FastQ files.
This tool is developed in C++ with multithreading supported to afford high performance."""

toolchain = {'name': 'GCC', 'version': '13.2.0'}

github_account = 'OpenGene'
source_urls = [GITHUB_SOURCE]
sources = ['v%(version)s.tar.gz']
checksums = ['4fad6db156e769d46071add8a778a13a5cb5186bc1e1a5f9b1ffd499d84d72b5']

dependencies = [
('zlib', '1.2.13'),
('libdeflate', '1.19'),
('ISA-L', '2.31.0'),
]

skipsteps = ['configure']

buildopts = ' CXX=${CXX}'

preinstallopts = 'mkdir -p %(installdir)s/bin && '

installopts = 'PREFIX=%(installdir)s'

sanity_check_paths = {
'files': ['bin/fastp'],
'dirs': [],
}

sanity_check_commands = [('fastp', '--help')]

moduleclass = 'bio'

0 comments on commit 9c5ffc0

Please sign in to comment.