Skip to content

Commit

Permalink
Merge pull request #1 from duke-malaria-collaboratory/cfmw-docupdate-1
Browse files Browse the repository at this point in the history
Update vignette
  • Loading branch information
zenalapp authored Oct 2, 2023
2 parents c4562b5 + 6bda6e5 commit 821d4ef
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions vignettes/bistro.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -68,7 +68,7 @@ Two required, and one optional but often recommended, datasets are required to r

### Bloodmeal STR profiles (`bloodmeal_profiles`)

The bloodmeal STR profiles dataset should have one row per allele for each bloodmeal and marker, and include the allele peak height. Homozygous markers should only be included once (i.e. as one row). It must have four columns named SampleName, Marker, Allele, and Height. Here is an example included with `bistro`:
The bloodmeal STR profiles dataset should have one row per allele for each bloodmeal and marker, and include the allele peak height. Homozygous markers should only be included once (i.e. as one row). It must have four columns named SampleName, Marker, Allele, and Height. The SampleName column should hold character values. Here is an example included with `bistro`:

```{r}
head(bloodmeal_profiles)
Expand All @@ -83,7 +83,7 @@ unique(bloodmeal_profiles$SampleName)

### Human STR profiles (`human_profiles`)

The human STR profiles dataset takes a similar format to the bloodmeal STR profiles dataset - it should have one row per allele for each human and marker, but does not require peak heights. Again, homozygous markers should only be included once. The dataset must have three columns named SampleName, Marker, and Allele. Here is an example:
The human STR profiles dataset takes a similar format to the bloodmeal STR profiles dataset - it should have one row per allele for each human and marker, but does not require peak heights. Again, homozygous markers should only be included once. The dataset must have three columns named SampleName, Marker, and Allele. The SampleName column should hold character values. Here is an example:

```{r}
head(human_profiles)
Expand Down

0 comments on commit 821d4ef

Please sign in to comment.