#sequencing_utilities
scripts for processing next generation sequencing data
##Douglas McCloskey
##Credits:
Ali Ebrahim for writing the original sequtil library from which this is derived
To install, please follow the instructions.
###Project Goals:
-
Compilation of all open-source next generation sequencing packages in a single docker image for fast and pain-free deployment
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Methods to run analyses on large batches of samples utilizing docker containers
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Methods for distributing data across storage servers and compute servers utilizing docker containers
###TODO:
add/update .py main to include all function parameters
modify shell scripts to call .py main
add docker_run scripts to run breseq using Docker