HBW is a repository hold code for implementing trio-based binning and bubble graph approaches to diploid assembly but for hybrid genomic datasets and tailored for the Wengan assembler.
The code under the trio-binning directory implement a novel machine learning algorithm to classify reads into paternal/maternal prior Wengan assembly.
The code under the bubble directory implement a novel pipeline for building partially haplotype-resolved sequences starting from a collapsed Wengan assembly.