Northwestern Atlantic ocean microbial community difference in small and large size fractions characterised through amplicon sequence

We determined the difference in community diversity between two size fractions of water samples from a single site, and the possbility of merging two size fractions to a comparable unit to samples that were not size fractionated.

Structure of the starting repository

Datasets

Dataset	Size fraction	Link
16S
18S

Generate the data

Run generate_data.sh from the cloned repo, then open the run_analysis.ipynb jupyter notebook and run all.

Final repository