roxgen2 update.

ddrichel · May 24, 2020 · a32080d · a32080d
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Showing 32 changed files with 369 additions and 128 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -63,4 +63,4 @@ biocViews: CopyNumberVariation, Software, Sequencing,
     VariantAnnotation, VariantDetection, Coverage, ImmunoOncology
 NeedsCompilation: no
 ByteCompile: yes
-RoxygenNote: 6.1.1
+RoxygenNote: 7.1.0
diff --git a/man/calculateBamCoverageByInterval.Rd b/man/calculateBamCoverageByInterval.Rd
diff --git a/man/calculateIntervalWeights.Rd b/man/calculateIntervalWeights.Rd
diff --git a/man/calculateMappingBiasVcf.Rd b/man/calculateMappingBiasVcf.Rd
diff --git a/man/calculatePowerDetectSomatic.Rd b/man/calculatePowerDetectSomatic.Rd
diff --git a/man/calculateTangentNormal.Rd b/man/calculateTangentNormal.Rd
diff --git a/man/callAlterations.Rd b/man/callAlterations.Rd
diff --git a/man/callAlterationsFromSegmentation.Rd b/man/callAlterationsFromSegmentation.Rd
diff --git a/man/callAmplificationsInLowPurity.Rd b/man/callAmplificationsInLowPurity.Rd
diff --git a/man/callCIN.Rd b/man/callCIN.Rd
diff --git a/man/callMutationBurden.Rd b/man/callMutationBurden.Rd
diff --git a/man/correctCoverageBias.Rd b/man/correctCoverageBias.Rd
diff --git a/man/createCurationFile.Rd b/man/createCurationFile.Rd
diff --git a/man/createNormalDatabase.Rd b/man/createNormalDatabase.Rd
diff --git a/man/filterIntervals.Rd b/man/filterIntervals.Rd
diff --git a/man/filterVcfBasic.Rd b/man/filterVcfBasic.Rd
diff --git a/man/filterVcfMuTect.Rd b/man/filterVcfMuTect.Rd
diff --git a/man/filterVcfMuTect2.Rd b/man/filterVcfMuTect2.Rd
diff --git a/man/getSexFromCoverage.Rd b/man/getSexFromCoverage.Rd
diff --git a/man/getSexFromVcf.Rd b/man/getSexFromVcf.Rd
diff --git a/man/plotAbs.Rd b/man/plotAbs.Rd