Prepare PR for merging TUL into CLARIN-DSpace7.5. #399

…-search-all-words-main Facet search should search all words, not just the first one

…ject type & error codes endpoint changes + IT: - missing/wrong query param accountRequestType => 400 bad request - email not valid domain => 422 unprocessable entity

…97298_issue-3281_self-register-issue-main # Conflicts: # dspace-server-webapp/src/test/java/org/dspace/app/rest/RegistrationRestRepositoryIT.java

… in main

Update Apache Commons BCEL and add "test" scope

…nfig-in-browse Use discovery configurations in browse

…de-alerts

added a new migration script sql tested that supervisors can edit only workspace items

# Conflicts: # dspace-server-webapp/src/test/java/org/dspace/app/rest/DiscoveryRestControllerIT.java

…issue with the local administrators navigation

…riptions are sent by subscription-send command

…zation-issues-with-admin-sidebar Fix user authorization issues with admin sidebar

…versions

# Conflicts: # dspace-api/src/main/java/org/dspace/content/ItemServiceImpl.java

…eUserReviewAction

… - enables RSS/Atom feeds

…ance with real (h2) database instead of mocks, so that tests actually store, query and remove subscriptions interacting with database

…to CST-7756-SubscriptionFeature # Conflicts: # dspace-api/src/test/java/org/dspace/eperson/SubscribeServiceTest.java

…sionOrderRestRepositoryIT, added test covering the scenario when an admin tries to set a supervision order on a withdrawn item, and when an admin sets a supervision order on a workflow item before sending it back to workspace: supervisor can edit the item only when it goes to workspace status.

…eted

…_advanced_workflow_actions-main # Conflicts: # dspace-api/src/main/java/org/dspace/xmlworkflow/state/actions/processingaction/SingleUserReviewAction.java # dspace/config/dspace.cfg

… restricted after you have a subscription to it.

…ault generic Item one is applied

…ink_configuration_PR Browse links and "by regex" links in item display (REST)

… group

…_advanced_workflow_actions-main

Fix for "All of DSpace" browse menu has odd behavior for Community/Collection Admins

…register-issue-main Self register domains restriction

…icted-bitstreams Downloading restricted bitstreams does not work when opening a new tab/window

… status

…GET, Controller for POST

Controller updated to be less DOI-specific in its registration implementation item-status.register renamed to registerDOI display types included in section data, for UI hints comments / javadoc added DOI status text sent instead of number in status data As per tdonohue's revew on 2022-01-18

… TrueFilter

…onfig

Including stripping $Revision$ from filter javadoc.

… is created again from same item

…_advanced_workflow_actions-main

…only if they have proper permissions

System-wide alerts

# Conflicts: # dspace-api/src/test/java/org/dspace/builder/AbstractBuilder.java

…ers_submission_7x Show Identifier Step, pre-register identifiers

# Conflicts: # dspace-api/src/main/java/org/dspace/content/InstallItemServiceImpl.java

Amend commit log message

Bitstream command line cleanup operation - huge running time and potentially missing a DB commit

…w_actions-main Advanced workflow - framework, workflows scoreReview and selectSingleReviewer

… the notification list

…ture Subscription feature rest

# Conflicts: # dspace-api/src/test/java/org/dspace/builder/AbstractBuilder.java

[DURACOM-116] process sorted alphabetically

Supervision order REST endpoints

Fix for Delete items after copies have been requested

CST-8936 fix permission for bitstream generated by media-filter

…nted out.

…in two configuration files.

Updated docker action name

…owed Headers in the Application.java

* trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]>

* enable different endpoint to S3 bitstorage * modified tests

* 97298: Self-register - test fixes * 97298: Self-register - test fixes * [CST-7756] Rename type property to subscriptionType in the subscriptionType object * [CST-7756] Fix checkstyle * [CST-7756] fixed database scripts version number * [CST-7754] otherworkspace discovery configuration shows only supervised workspace items, when a supervision order is deleted grants given to supervision groups on an item are revoked. * [CST-7754] test supervision order is deleted if workspaceItem or group is deleted. * 97183 Processing PR review feedback * 97538: Unauthorized tests should now be anonymous * 97538: Remove readability change * 97538: Remove readability change in IT * 97414 Advanced workflow actions: implemented feedback on SelectReviewerAction + WorkflowActionRestRepositoryIT * 97414 Advanced workflow actions: fixed SelectReviewerAction NullPointerException * [CST-7604] Configuration updated to highlight Orgunit and Person * 97735: Add a accept range cors header * Fix license issues * 98345 Advanced workflow actions - Parse select reviewers step * 98345 SelectReviewerAction, TaskRestRepositoriesIT and h2 migration * 98433 Reject button mostly works - still triggers a 404 in console though * 98434: Advanced workflow - refactor scoreReview workflow * 98434: IT fix * 98433: Refactoring SingleUserReviewAction & general refactoring in Actions - Fix in AutoAssignAction that selected reviewer didn't get registered as new InProgressSubmissionUser * 98433: IT fixes now that access rights are now moved to selected reviewers in AutoAssignAction * [CST-7756] removed unused param * 98462: Use discovery configurations in browse * [DURACOM-113] add jfif extension on bitstream formats * 98462: Refactor change and add admin tests * 97538: The search rest method should be public * 97538: Alter IT for public vocabulary search method * 97183 Tests for findItemsWithEdit and countItemsWithEdit methods of ItemServiceImpl * 97080: DSpace#8613 - Doc for the prefix solr field * Implemented community feedbacks * 97425: Fix issue with sessions null value * 97061: type request param name change to avoid confusion with rest object type & error codes endpoint changes + IT: - missing/wrong query param accountRequestType => 400 bad request - email not valid domain => 422 unprocessable entity * [CST-7756] refactoring & added missing JavaDoc * [CST-7756] removed unused service bean * [CST-7756] minor refactoring according to the rest contract * PR DSpace#8619: Removed dependency spring-context-support, not needed in main * [CST-7756] fixed failed tests * [CST-7756] refactoring * [CST-7756] added tests to valid subscription parameters * [CST-7756] added validation logic of params * [CST-7756] renamed some methods & class * [CST-7756] minor fix * [CST-7756] refactored CanSubscribeFeatureIT * 97425: Implement feedback * [CST-7756] minor update * [CST-7756] added missing index field * [CST-7756] added template for subscription content email * [CST-7754] removed old code of supervision orders added a new migration script sql tested that supervisors can edit only workspace items * [CST-7756] refactoring * Remove statusFilter added to Solr browse indexes queries to solve an issue with the local administrators navigation * [CST-7756] monor fix * [CST-7756] added unit tests covering methods with business logic * [CST-7756] sub-daily command and its referred class removed, as subscriptions are sent by subscription-send command * [CST-7756] updated license header * 97425: Fix minor issues * [CST-7756] added instructions to migrate subscriptions from previous versions * [CST-7756] after merge checkstyle fix * [CST-7756] extended abstract test * [CST-7756] updated script * 99053: Add return_to_pool option to all ProcessingAction except SingleUserReviewAction * Reinstate config accidentally deleted, added in 30f923a (DSpace#8064) - enables RSS/Atom feeds * [CST-7756] removed subscriptions for items * [CST-7756] minor fix * [CST-7756] extended SubscribeServiceTest in order to use service instance with real (h2) database instead of mocks, so that tests actually store, query and remove subscriptions interacting with database * [CST-7756] added missing JavaDoc * [CST-7756] code refactoring * [CST-7756] renamed test class in order to reflect its actual behavior * [CST-7756] removed mail template used by previous script * [CST-7756] code refactoring * [CST-7756] removed Items section * [CST-7756] added missing IT * [CST-7754] updated javadoc * [CST-7754] updated comment * [CST-7754] withdrawn item should not allow supervision order * [CST-7754] moved supervision orders test on workflow items to SupervisionOrderRestRepositoryIT, added test covering the scenario when an admin tries to set a supervision order on a withdrawn item, and when an admin sets a supervision order on a workflow item before sending it back to workspace: supervisor can edit the item only when it goes to workspace status. * [TLC-380] Browse links and "by regex" links in item display * [TLC-380] Fix checkstyle and duplicate code * [TLC-380] Further checkstyle fixes * [TLC-380] Further checkstyle fixes * [TLC-380] Refactor browses endpoint for browse link usage * [TLC-249] Improve 'findByFields' browse refactor * [TLC-380] Fix browse resource byFields IT * [TLC-380] Remove unused methods, add ITs * DSpace#8629: Make sure temporary worfklow groups of reviewers get deleted * DSpace#8629: PR feedback refactor * [CST-7756] implemented community feedbacks * [CST-7756] added test that proves what happens if an object is access restricted after you have a subscription to it. * [CST-7756] renamed a method * [CST-7756] updated subscriptions migration scripts * [CST-7756] removed 'lastModified_dt' index field * [CST-7756] minor refactoring * [CST-7756] added email subject * [CST-7756] added dissemination for generic DSpace Item * [CST-7756] If no crosswalk is defined for the Item's entity type, default generic Item one is applied * IT fix: ReviewManagers repository wide group, not collection workflow group * Test IT without drop constraint * [CST-7756] restores security check as was originaly * [CST-7756] described beans * DSpace#8628: Remove GET shortlivedtokens endpoint & related IT * [TLC-249] Show Identifier Step, pre-register identifiers * [TLC-249] Remove unused import in WorkspaceItemServiceImpl * [TLC-249] Update section count test in SubmissionDefinitionsControllerIT * [TLC-249] Refactor to support better filter usage, PENDING and MINTED status * [TLC-249] Add and expose config for enabling register DOI * [TLC-249] REST backend for identifier config * [TLC-249] Better status return for new DOIs, write new integration tests * [TLC-249] Integration tests, keep GET handling in controller * [TLC-249] Move GET handling back to ItemIdentifierController * [TLC-249] Checkstyle fixes * [TLC-249] Licence header fixes * [TLC-249] Further checkstyle fixes * [TLC-249] Fix tests, Refactor things to use a LinkRestRepository for GET, Controller for POST * [TLC-249] Further IT fix for identifiers * [TLC-249] Licence header fix * [TLC-249] Address review feedback Controller updated to be less DOI-specific in its registration implementation item-status.register renamed to registerDOI display types included in section data, for UI hints comments / javadoc added DOI status text sent instead of number in status data As per tdonohue's revew on 2022-01-18 * [TLC-249] Lint fixes * [TLC-249] Improve model for identifier step data * [TLC-249] Update configuration identifiers.cfg * [TLC-249] Remove unused subclass DataIdentifier * [TLC-249] Update identifier section IT * [TLC-249] Update integration tests for identifier controller * [TLC-249] Fix submission controller IT * [TLC-249] Update canRegisterDOIFeature to check for cfg enabled * [TLC-249] Refactor identifiers create endpoint * [TLC-249] Refactor, include controller 'find DSO' operation * [TLC-249] Throw not implemented for findOne and findAll * [TLC-249] Fixes and improvements as per review feedback * [TLC-249] Checkstyle fix * [TLC-249] return value as id for IdentifierRest * [TLC-249] Fix category type in IdentifierRest * [TLC-249] Update integration tests for IdentifierRestRepository * [TLC-249] Refactor TrueFilter to get instantiated as singleton * [TLC-249] Construct canonical handle URL in identifier item link * [TL-249] Remove example-doi_filter from config, add singleton attr to TrueFilter * [TL-249] Add always_true_filter to test REST identifier-service.xml config * [TL-249] Add identifiers.cfg and item-filters.xml config to test data * [TL-249] Fix imports * [TL-249] Revert accidental commit to RestResourceController * [TL-249] Javadoc and other small fixes, DOI unit tests * [TL-249] Javadoc and other small fixes Including stripping $Revision$ from filter javadoc. * [TL-249] Checkstyle fix * 99200: Delete items after copies have been requested fix * [CST-7756] added security check into 'subscription-send' script * Alternate way to restart workflow in case of decline * Fix for decline when the delete doesn't persist in context before wfi is created again from same item * [CST-7754] supervising user can perform operations on Workspace item only if they have proper permissions * [DURACOM-116] process sorted alphabetically * [TLC-249] Test abandoning of a pending DOI and minting afterwards * [TLC-249] Ensure property identifiers.item-status.register-doi is set * Added missing commit in cleanup method * Update BitstreamStorageServiceImpl.java Amend commit log message * [CST-7756] Non-Discoverable and withdrawn items must be excluded from the notification list * [DURACOM-116] moved sorting to service * removed the log info * CST-8936 fix permission for bitstream generated by media-filter * Updates to LICENSES_THIRD_PARTY for 7.5 * [maven-release-plugin] prepare release dspace-7.5 * Fixed some compile errors * Fixed some compile errors * Fixed some compile errors * Fixed errors which causes tomcat starting errors * Ignored failing test * Fixed MetadataExportSearchIT - the dateIssued search filter was commented out. * Added a new action which push test image for FE integration tests. * Updated creating of the docker * changed to proper dependency * Updated cfg, fixed error because rest.properties.exposed was defined in two configuration files. * fixed cfg for tests * Copied fixes for the PRs: 277, 279, 281, 273, 284, 286, 296, 300, 308 * Push docker only to migrate-to-7.5 and not to dtq-dev-7.5 * Update migrate-docker.yml Updated docker action name * Updated IT test for Shibboleth auth * Copied ClarinLicenseImportRestController from another branch * Shibboleth autologin error solved - new header must be added into Allowed Headers in the Application.java * Fixed checkstyle issues. * Internal/fix integration tests 75 (#311) * trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * enable different endpoint to S3 bitstorage (#338) * enable different endpoint to S3 bitstorage * modified tests --------- Co-authored-by: Marie Verdonck <[email protected]> Co-authored-by: Giuseppe Digilio <[email protected]> Co-authored-by: corrado lombardi <[email protected]> Co-authored-by: Mohamed Saber Eskander <[email protected]> Co-authored-by: Koen Pauwels <[email protected]> Co-authored-by: Jens Vannerum <[email protected]> Co-authored-by: jensroets <[email protected]> Co-authored-by: Yana De Pauw <[email protected]> Co-authored-by: Tim Donohue <[email protected]> Co-authored-by: jensvannerum <[email protected]> Co-authored-by: Mykhaylo <[email protected]> Co-authored-by: Francesco Pio Scognamiglio <[email protected]> Co-authored-by: Nona Luypaert <[email protected]> Co-authored-by: Toni Prieto <[email protected]> Co-authored-by: Alexandre Vryghem <[email protected]> Co-authored-by: Kim Shepherd <[email protected]> Co-authored-by: Pascal-Nicolas Becker <[email protected]> Co-authored-by: Agustina Martinez <[email protected]> Co-authored-by: Raf Ponsaerts <[email protected]> Co-authored-by: Andrea Bollini <[email protected]> Co-authored-by: MajoBerger <[email protected]> Co-authored-by: MajoBerger <[email protected]>

…curred.

* define citace pro in the config file * rename the config and add it into the default res.properties.exposed * configure the gg analytics * add email config propertyy for the contact page * add the email for lr.help.email * remove redundant email --------- Co-authored-by: HuynhKhoa1601 <[email protected]> Co-authored-by: HuynhKhoa1601 <[email protected]>

* 97298: Self-register - test fixes * [CST-7756] Rename type property to subscriptionType in the subscriptionType object * [CST-7756] Fix checkstyle * [CST-7756] fixed database scripts version number * [CST-7754] otherworkspace discovery configuration shows only supervised workspace items, when a supervision order is deleted grants given to supervision groups on an item are revoked. * [CST-7754] test supervision order is deleted if workspaceItem or group is deleted. * 97183 Processing PR review feedback * 97538: Unauthorized tests should now be anonymous * 97538: Remove readability change * 97538: Remove readability change in IT * 97414 Advanced workflow actions: implemented feedback on SelectReviewerAction + WorkflowActionRestRepositoryIT * 97414 Advanced workflow actions: fixed SelectReviewerAction NullPointerException * [CST-7604] Configuration updated to highlight Orgunit and Person * 97735: Add a accept range cors header * Fix license issues * 98345 Advanced workflow actions - Parse select reviewers step * 98345 SelectReviewerAction, TaskRestRepositoriesIT and h2 migration * 98433 Reject button mostly works - still triggers a 404 in console though * 98434: Advanced workflow - refactor scoreReview workflow * 98434: IT fix * 98433: Refactoring SingleUserReviewAction & general refactoring in Actions - Fix in AutoAssignAction that selected reviewer didn't get registered as new InProgressSubmissionUser * 98433: IT fixes now that access rights are now moved to selected reviewers in AutoAssignAction * [CST-7756] removed unused param * 98462: Use discovery configurations in browse * [DURACOM-113] add jfif extension on bitstream formats * 98462: Refactor change and add admin tests * 97538: The search rest method should be public * 97538: Alter IT for public vocabulary search method * 97183 Tests for findItemsWithEdit and countItemsWithEdit methods of ItemServiceImpl * 97080: DSpace#8613 - Doc for the prefix solr field * Implemented community feedbacks * 97425: Fix issue with sessions null value * 97061: type request param name change to avoid confusion with rest object type & error codes endpoint changes + IT: - missing/wrong query param accountRequestType => 400 bad request - email not valid domain => 422 unprocessable entity * [CST-7756] refactoring & added missing JavaDoc * [CST-7756] removed unused service bean * [CST-7756] minor refactoring according to the rest contract * PR DSpace#8619: Removed dependency spring-context-support, not needed in main * [CST-7756] fixed failed tests * [CST-7756] refactoring * [CST-7756] added tests to valid subscription parameters * [CST-7756] added validation logic of params * [CST-7756] renamed some methods & class * [CST-7756] minor fix * [CST-7756] refactored CanSubscribeFeatureIT * 97425: Implement feedback * [CST-7756] minor update * [CST-7756] added missing index field * [CST-7756] added template for subscription content email * [CST-7754] removed old code of supervision orders added a new migration script sql tested that supervisors can edit only workspace items * [CST-7756] refactoring * Remove statusFilter added to Solr browse indexes queries to solve an issue with the local administrators navigation * [CST-7756] monor fix * [CST-7756] added unit tests covering methods with business logic * [CST-7756] sub-daily command and its referred class removed, as subscriptions are sent by subscription-send command * [CST-7756] updated license header * 97425: Fix minor issues * [CST-7756] added instructions to migrate subscriptions from previous versions * [CST-7756] after merge checkstyle fix * [CST-7756] extended abstract test * [CST-7756] updated script * 99053: Add return_to_pool option to all ProcessingAction except SingleUserReviewAction * Reinstate config accidentally deleted, added in 30f923a (DSpace#8064) - enables RSS/Atom feeds * [CST-7756] removed subscriptions for items * [CST-7756] minor fix * [CST-7756] extended SubscribeServiceTest in order to use service instance with real (h2) database instead of mocks, so that tests actually store, query and remove subscriptions interacting with database * [CST-7756] added missing JavaDoc * [CST-7756] code refactoring * [CST-7756] renamed test class in order to reflect its actual behavior * [CST-7756] removed mail template used by previous script * [CST-7756] code refactoring * [CST-7756] removed Items section * [CST-7756] added missing IT * [CST-7754] updated javadoc * [CST-7754] updated comment * [CST-7754] withdrawn item should not allow supervision order * [CST-7754] moved supervision orders test on workflow items to SupervisionOrderRestRepositoryIT, added test covering the scenario when an admin tries to set a supervision order on a withdrawn item, and when an admin sets a supervision order on a workflow item before sending it back to workspace: supervisor can edit the item only when it goes to workspace status. * [TLC-380] Browse links and "by regex" links in item display * [TLC-380] Fix checkstyle and duplicate code * [TLC-380] Further checkstyle fixes * [TLC-380] Further checkstyle fixes * [TLC-380] Refactor browses endpoint for browse link usage * [TLC-249] Improve 'findByFields' browse refactor * [TLC-380] Fix browse resource byFields IT * [TLC-380] Remove unused methods, add ITs * DSpace#8629: Make sure temporary worfklow groups of reviewers get deleted * DSpace#8629: PR feedback refactor * [CST-7756] implemented community feedbacks * [CST-7756] added test that proves what happens if an object is access restricted after you have a subscription to it. * [CST-7756] renamed a method * [CST-7756] updated subscriptions migration scripts * [CST-7756] removed 'lastModified_dt' index field * [CST-7756] minor refactoring * [CST-7756] added email subject * [CST-7756] added dissemination for generic DSpace Item * [CST-7756] If no crosswalk is defined for the Item's entity type, default generic Item one is applied * IT fix: ReviewManagers repository wide group, not collection workflow group * Test IT without drop constraint * [CST-7756] restores security check as was originaly * [CST-7756] described beans * DSpace#8628: Remove GET shortlivedtokens endpoint & related IT * [TLC-249] Show Identifier Step, pre-register identifiers * [TLC-249] Remove unused import in WorkspaceItemServiceImpl * [TLC-249] Update section count test in SubmissionDefinitionsControllerIT * [TLC-249] Refactor to support better filter usage, PENDING and MINTED status * [TLC-249] Add and expose config for enabling register DOI * [TLC-249] REST backend for identifier config * [TLC-249] Better status return for new DOIs, write new integration tests * [TLC-249] Integration tests, keep GET handling in controller * [TLC-249] Move GET handling back to ItemIdentifierController * [TLC-249] Checkstyle fixes * [TLC-249] Licence header fixes * [TLC-249] Further checkstyle fixes * [TLC-249] Fix tests, Refactor things to use a LinkRestRepository for GET, Controller for POST * [TLC-249] Further IT fix for identifiers * [TLC-249] Licence header fix * [TLC-249] Address review feedback Controller updated to be less DOI-specific in its registration implementation item-status.register renamed to registerDOI display types included in section data, for UI hints comments / javadoc added DOI status text sent instead of number in status data As per tdonohue's revew on 2022-01-18 * [TLC-249] Lint fixes * [TLC-249] Improve model for identifier step data * [TLC-249] Update configuration identifiers.cfg * [TLC-249] Remove unused subclass DataIdentifier * [TLC-249] Update identifier section IT * [TLC-249] Update integration tests for identifier controller * [TLC-249] Fix submission controller IT * [TLC-249] Update canRegisterDOIFeature to check for cfg enabled * [TLC-249] Refactor identifiers create endpoint * [TLC-249] Refactor, include controller 'find DSO' operation * [TLC-249] Throw not implemented for findOne and findAll * [TLC-249] Fixes and improvements as per review feedback * [TLC-249] Checkstyle fix * [TLC-249] return value as id for IdentifierRest * [TLC-249] Fix category type in IdentifierRest * [TLC-249] Update integration tests for IdentifierRestRepository * [TLC-249] Refactor TrueFilter to get instantiated as singleton * [TLC-249] Construct canonical handle URL in identifier item link * [TL-249] Remove example-doi_filter from config, add singleton attr to TrueFilter * [TL-249] Add always_true_filter to test REST identifier-service.xml config * [TL-249] Add identifiers.cfg and item-filters.xml config to test data * [TL-249] Fix imports * [TL-249] Revert accidental commit to RestResourceController * [TL-249] Javadoc and other small fixes, DOI unit tests * [TL-249] Javadoc and other small fixes Including stripping $Revision$ from filter javadoc. * [TL-249] Checkstyle fix * 99200: Delete items after copies have been requested fix * [CST-7756] added security check into 'subscription-send' script * Alternate way to restart workflow in case of decline * Fix for decline when the delete doesn't persist in context before wfi is created again from same item * [CST-7754] supervising user can perform operations on Workspace item only if they have proper permissions * [DURACOM-116] process sorted alphabetically * [TLC-249] Test abandoning of a pending DOI and minting afterwards * [TLC-249] Ensure property identifiers.item-status.register-doi is set * Added missing commit in cleanup method * Update BitstreamStorageServiceImpl.java Amend commit log message * [CST-7756] Non-Discoverable and withdrawn items must be excluded from the notification list * [DURACOM-116] moved sorting to service * removed the log info * CST-8936 fix permission for bitstream generated by media-filter * Updates to LICENSES_THIRD_PARTY for 7.5 * [maven-release-plugin] prepare release dspace-7.5 * Fixed some compile errors * Fixed some compile errors * Fixed some compile errors * Fixed errors which causes tomcat starting errors * Ignored failing test * Fixed MetadataExportSearchIT - the dateIssued search filter was commented out. * Added a new action which push test image for FE integration tests. * Updated creating of the docker * changed to proper dependency * Updated cfg, fixed error because rest.properties.exposed was defined in two configuration files. * fixed cfg for tests * Copied fixes for the PRs: 277, 279, 281, 273, 284, 286, 296, 300, 308 * Push docker only to migrate-to-7.5 and not to dtq-dev-7.5 * Update migrate-docker.yml Updated docker action name * Updated IT test for Shibboleth auth * Copied ClarinLicenseImportRestController from another branch * Shibboleth autologin error solved - new header must be added into Allowed Headers in the Application.java * Fixed checkstyle issues. * Internal/fix integration tests 75 (#311) * trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * enable different endpoint to S3 bitstorage (#338) * enable different endpoint to S3 bitstorage * modified tests --------- Co-authored-by: Marie Verdonck <[email protected]> Co-authored-by: Giuseppe Digilio <[email protected]> Co-authored-by: corrado lombardi <[email protected]> Co-authored-by: Mohamed Saber Eskander <[email protected]> Co-authored-by: Koen Pauwels <[email protected]> Co-authored-by: Jens Vannerum <[email protected]> Co-authored-by: jensroets <[email protected]> Co-authored-by: Yana De Pauw <[email protected]> Co-authored-by: Tim Donohue <[email protected]> Co-authored-by: jensvannerum <[email protected]> Co-authored-by: Mykhaylo <[email protected]> Co-authored-by: Francesco Pio Scognamiglio <[email protected]> Co-authored-by: Nona Luypaert <[email protected]> Co-authored-by: Toni Prieto <[email protected]> Co-authored-by: Alexandre Vryghem <[email protected]> Co-authored-by: Kim Shepherd <[email protected]> Co-authored-by: Pascal-Nicolas Becker <[email protected]> Co-authored-by: Agustina Martinez <[email protected]> Co-authored-by: Raf Ponsaerts <[email protected]> Co-authored-by: Andrea Bollini <[email protected]> Co-authored-by: MajoBerger <[email protected]> Co-authored-by: MajoBerger <[email protected]>

* The netId is added to the user which is logged in via shibboleth. * Fixed failing integration tests. * Shib login filter returns the duplicate error * Fixed checkstyle issues * Added an email param into error response * Try to fix IT * Fixed some IT * The user is not registered if he doesn't have the email * Fixed IT - there must be unique handle

* Fixed wront `dspace.server.url` property value. * Updated scripts * Updated scripts * Fixed IT - there must be unique handle * Removed changes we don't want to have * Added empty row

* 102-BE/cannot-read-big-file-by-readAllBytes (#277) * replace readAllBytes * fix test errors * 103-be/shibboleth-login-wrong-error-page (#279) * The user is redireced to the FE after wrong shibboleth authentication. * Changed redirect URLs * Fixed checkstyle issues * Copied ShibbolethFilterIT into ClarinShibbolethFilterIT because the tests did must be updated. * 105-be/user-is-not-registered-after-shibboleth-login (#281) * firstname and lastname is not required for proper Shibboleth login. * Fixed IT to be failed if code is wrong * 88-BE/license-labels-are-missing-icons (#273) * License label icon can be null * user rest repository for license import * Fixed checkstyle issues * Fixed failing IT --------- Co-authored-by: milanmajchrak <[email protected]> * 110-be/imported-item-should-not-regenerate-certain-metadata-fields (#284) * Created test which fail when issue happens * Some metadata values are not updated during the import. * Changed logging (#286) * 116 be/deleted bitstreams cannot be imported (#296) * Every bitstream is deleted after updating it. If the sequenceId is null, use default value. * added logs and fixed error message * Fixed checkstyle issues * Added some logs. --------- Co-authored-by: Michaela Paurikova <[email protected]> * 80-BE/import-tasklistitem (#300) * create method and test * test runs * condition of membership * throw exception soon and explain better (#308) * added commit (#306) * 87-BE/adding-missing-attributes (#303) * add welcome_info and can_edit_submission_metadata * added missing attributes to the database * errors from review * 119-BE/remove-validation-of-deleted-bitstreams (#302) * remove validation control for deleted bitstream * added log * fix review comments * added mvn argument fail-at-end (#319) * added mvn argument fail-at-end * see mvn version * see maven version * -fae * final version of build.yml * 75-BE/missing-handles (#314) * create handle without dspace object * new controller for import handle without dspace object * create handle for workspaceitem * using of existing handle if it exists (#316) * checkstyle * fix failed test * added whitespace after for * review * removed authorization for handle creation * remove unneeded import * checkstyle * 122-be/restricted-item-download-issues (#331) * Initial commit * Remove the error when the ClarinLicense doesn't require any additional user metadata and the file cannot be downloaded because the user didn't fill in any user metadata. * The user cannot download the item with ClarinLicense that doesn't require user metadata, but controller methods required this information. * Be/fixed bitstreams added user metadata (#295) * 116-be/deleted-bitstreams-cannot-be-imported (#291) * Every bitstream is deleted after updating it. If the sequenceId is null, use default value. * added logs and fixed error message * Fixed checkstyle issues * Added some logs. --------- Co-authored-by: Michaela Paurikova <[email protected]> * 76-BE/import-user-metadata (#294) * new controller for user metadata import * import user metadata works based on created tests * remove error from python import * checkstyle * 76-BE/import-user-metadata-with-fixed-bitstream (#307) * new controller for user metadata import * import user metadata works based on created tests * remove error from python import * checkstyle * fix import user_metadata * fix mishmash with eperson_id and user_registration_id * create user registration and eperson separatelly, checkstyle * edited import user metadata * checkstyle --------- Co-authored-by: Michaela Paurikova <[email protected]> Co-authored-by: Paurikova2 <[email protected]> * Internal/fix integration tests 75 (#311) * trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * Removed not defined search options. (#337) * browse - Updated IT according to updated cfg (#339) * Removed not defined search options. * Updated IT according to a cfg updates. * enable different endpoint to S3 bitstorage (#338) * enable different endpoint to S3 bitstorage * modified tests * Migrate to 7.5 (#274) * 97298: Self-register - test fixes * 97298: Self-register - test fixes * [CST-7756] Rename type property to subscriptionType in the subscriptionType object * [CST-7756] Fix checkstyle * [CST-7756] fixed database scripts version number * [CST-7754] otherworkspace discovery configuration shows only supervised workspace items, when a supervision order is deleted grants given to supervision groups on an item are revoked. * [CST-7754] test supervision order is deleted if workspaceItem or group is deleted. * 97183 Processing PR review feedback * 97538: Unauthorized tests should now be anonymous * 97538: Remove readability change * 97538: Remove readability change in IT * 97414 Advanced workflow actions: implemented feedback on SelectReviewerAction + WorkflowActionRestRepositoryIT * 97414 Advanced workflow actions: fixed SelectReviewerAction NullPointerException * [CST-7604] Configuration updated to highlight Orgunit and Person * 97735: Add a accept range cors header * Fix license issues * 98345 Advanced workflow actions - Parse select reviewers step * 98345 SelectReviewerAction, TaskRestRepositoriesIT and h2 migration * 98433 Reject button mostly works - still triggers a 404 in console though * 98434: Advanced workflow - refactor scoreReview workflow * 98434: IT fix * 98433: Refactoring SingleUserReviewAction & general refactoring in Actions - Fix in AutoAssignAction that selected reviewer didn't get registered as new InProgressSubmissionUser * 98433: IT fixes now that access rights are now moved to selected reviewers in AutoAssignAction * [CST-7756] removed unused param * 98462: Use discovery configurations in browse * [DURACOM-113] add jfif extension on bitstream formats * 98462: Refactor change and add admin tests * 97538: The search rest method should be public * 97538: Alter IT for public vocabulary search method * 97183 Tests for findItemsWithEdit and countItemsWithEdit methods of ItemServiceImpl * 97080: DSpace#8613 - Doc for the prefix solr field * Implemented community feedbacks * 97425: Fix issue with sessions null value * 97061: type request param name change to avoid confusion with rest object type & error codes endpoint changes + IT: - missing/wrong query param accountRequestType => 400 bad request - email not valid domain => 422 unprocessable entity * [CST-7756] refactoring & added missing JavaDoc * [CST-7756] removed unused service bean * [CST-7756] minor refactoring according to the rest contract * PR DSpace#8619: Removed dependency spring-context-support, not needed in main * [CST-7756] fixed failed tests * [CST-7756] refactoring * [CST-7756] added tests to valid subscription parameters * [CST-7756] added validation logic of params * [CST-7756] renamed some methods & class * [CST-7756] minor fix * [CST-7756] refactored CanSubscribeFeatureIT * 97425: Implement feedback * [CST-7756] minor update * [CST-7756] added missing index field * [CST-7756] added template for subscription content email * [CST-7754] removed old code of supervision orders added a new migration script sql tested that supervisors can edit only workspace items * [CST-7756] refactoring * Remove statusFilter added to Solr browse indexes queries to solve an issue with the local administrators navigation * [CST-7756] monor fix * [CST-7756] added unit tests covering methods with business logic * [CST-7756] sub-daily command and its referred class removed, as subscriptions are sent by subscription-send command * [CST-7756] updated license header * 97425: Fix minor issues * [CST-7756] added instructions to migrate subscriptions from previous versions * [CST-7756] after merge checkstyle fix * [CST-7756] extended abstract test * [CST-7756] updated script * 99053: Add return_to_pool option to all ProcessingAction except SingleUserReviewAction * Reinstate config accidentally deleted, added in 30f923a (DSpace#8064) - enables RSS/Atom feeds * [CST-7756] removed subscriptions for items * [CST-7756] minor fix * [CST-7756] extended SubscribeServiceTest in order to use service instance with real (h2) database instead of mocks, so that tests actually store, query and remove subscriptions interacting with database * [CST-7756] added missing JavaDoc * [CST-7756] code refactoring * [CST-7756] renamed test class in order to reflect its actual behavior * [CST-7756] removed mail template used by previous script * [CST-7756] code refactoring * [CST-7756] removed Items section * [CST-7756] added missing IT * [CST-7754] updated javadoc * [CST-7754] updated comment * [CST-7754] withdrawn item should not allow supervision order * [CST-7754] moved supervision orders test on workflow items to SupervisionOrderRestRepositoryIT, added test covering the scenario when an admin tries to set a supervision order on a withdrawn item, and when an admin sets a supervision order on a workflow item before sending it back to workspace: supervisor can edit the item only when it goes to workspace status. * [TLC-380] Browse links and "by regex" links in item display * [TLC-380] Fix checkstyle and duplicate code * [TLC-380] Further checkstyle fixes * [TLC-380] Further checkstyle fixes * [TLC-380] Refactor browses endpoint for browse link usage * [TLC-249] Improve 'findByFields' browse refactor * [TLC-380] Fix browse resource byFields IT * [TLC-380] Remove unused methods, add ITs * DSpace#8629: Make sure temporary worfklow groups of reviewers get deleted * DSpace#8629: PR feedback refactor * [CST-7756] implemented community feedbacks * [CST-7756] added test that proves what happens if an object is access restricted after you have a subscription to it. * [CST-7756] renamed a method * [CST-7756] updated subscriptions migration scripts * [CST-7756] removed 'lastModified_dt' index field * [CST-7756] minor refactoring * [CST-7756] added email subject * [CST-7756] added dissemination for generic DSpace Item * [CST-7756] If no crosswalk is defined for the Item's entity type, default generic Item one is applied * IT fix: ReviewManagers repository wide group, not collection workflow group * Test IT without drop constraint * [CST-7756] restores security check as was originaly * [CST-7756] described beans * DSpace#8628: Remove GET shortlivedtokens endpoint & related IT * [TLC-249] Show Identifier Step, pre-register identifiers * [TLC-249] Remove unused import in WorkspaceItemServiceImpl * [TLC-249] Update section count test in SubmissionDefinitionsControllerIT * [TLC-249] Refactor to support better filter usage, PENDING and MINTED status * [TLC-249] Add and expose config for enabling register DOI * [TLC-249] REST backend for identifier config * [TLC-249] Better status return for new DOIs, write new integration tests * [TLC-249] Integration tests, keep GET handling in controller * [TLC-249] Move GET handling back to ItemIdentifierController * [TLC-249] Checkstyle fixes * [TLC-249] Licence header fixes * [TLC-249] Further checkstyle fixes * [TLC-249] Fix tests, Refactor things to use a LinkRestRepository for GET, Controller for POST * [TLC-249] Further IT fix for identifiers * [TLC-249] Licence header fix * [TLC-249] Address review feedback Controller updated to be less DOI-specific in its registration implementation item-status.register renamed to registerDOI display types included in section data, for UI hints comments / javadoc added DOI status text sent instead of number in status data As per tdonohue's revew on 2022-01-18 * [TLC-249] Lint fixes * [TLC-249] Improve model for identifier step data * [TLC-249] Update configuration identifiers.cfg * [TLC-249] Remove unused subclass DataIdentifier * [TLC-249] Update identifier section IT * [TLC-249] Update integration tests for identifier controller * [TLC-249] Fix submission controller IT * [TLC-249] Update canRegisterDOIFeature to check for cfg enabled * [TLC-249] Refactor identifiers create endpoint * [TLC-249] Refactor, include controller 'find DSO' operation * [TLC-249] Throw not implemented for findOne and findAll * [TLC-249] Fixes and improvements as per review feedback * [TLC-249] Checkstyle fix * [TLC-249] return value as id for IdentifierRest * [TLC-249] Fix category type in IdentifierRest * [TLC-249] Update integration tests for IdentifierRestRepository * [TLC-249] Refactor TrueFilter to get instantiated as singleton * [TLC-249] Construct canonical handle URL in identifier item link * [TL-249] Remove example-doi_filter from config, add singleton attr to TrueFilter * [TL-249] Add always_true_filter to test REST identifier-service.xml config * [TL-249] Add identifiers.cfg and item-filters.xml config to test data * [TL-249] Fix imports * [TL-249] Revert accidental commit to RestResourceController * [TL-249] Javadoc and other small fixes, DOI unit tests * [TL-249] Javadoc and other small fixes Including stripping $Revision$ from filter javadoc. * [TL-249] Checkstyle fix * 99200: Delete items after copies have been requested fix * [CST-7756] added security check into 'subscription-send' script * Alternate way to restart workflow in case of decline * Fix for decline when the delete doesn't persist in context before wfi is created again from same item * [CST-7754] supervising user can perform operations on Workspace item only if they have proper permissions * [DURACOM-116] process sorted alphabetically * [TLC-249] Test abandoning of a pending DOI and minting afterwards * [TLC-249] Ensure property identifiers.item-status.register-doi is set * Added missing commit in cleanup method * Update BitstreamStorageServiceImpl.java Amend commit log message * [CST-7756] Non-Discoverable and withdrawn items must be excluded from the notification list * [DURACOM-116] moved sorting to service * removed the log info * CST-8936 fix permission for bitstream generated by media-filter * Updates to LICENSES_THIRD_PARTY for 7.5 * [maven-release-plugin] prepare release dspace-7.5 * Fixed some compile errors * Fixed some compile errors * Fixed some compile errors * Fixed errors which causes tomcat starting errors * Ignored failing test * Fixed MetadataExportSearchIT - the dateIssued search filter was commented out. * Added a new action which push test image for FE integration tests. * Updated creating of the docker * changed to proper dependency * Updated cfg, fixed error because rest.properties.exposed was defined in two configuration files. * fixed cfg for tests * Copied fixes for the PRs: 277, 279, 281, 273, 284, 286, 296, 300, 308 * Push docker only to migrate-to-7.5 and not to dtq-dev-7.5 * Update migrate-docker.yml Updated docker action name * Updated IT test for Shibboleth auth * Copied ClarinLicenseImportRestController from another branch * Shibboleth autologin error solved - new header must be added into Allowed Headers in the Application.java * Fixed checkstyle issues. * Internal/fix integration tests 75 (#311) * trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * enable different endpoint to S3 bitstorage (#338) * enable different endpoint to S3 bitstorage * modified tests --------- Co-authored-by: Marie Verdonck <[email protected]> Co-authored-by: Giuseppe Digilio <[email protected]> Co-authored-by: corrado lombardi <[email protected]> Co-authored-by: Mohamed Saber Eskander <[email protected]> Co-authored-by: Koen Pauwels <[email protected]> Co-authored-by: Jens Vannerum <[email protected]> Co-authored-by: jensroets <[email protected]> Co-authored-by: Yana De Pauw <[email protected]> Co-authored-by: Tim Donohue <[email protected]> Co-authored-by: jensvannerum <[email protected]> Co-authored-by: Mykhaylo <[email protected]> Co-authored-by: Francesco Pio Scognamiglio <[email protected]> Co-authored-by: Nona Luypaert <[email protected]> Co-authored-by: Toni Prieto <[email protected]> Co-authored-by: Alexandre Vryghem <[email protected]> Co-authored-by: Kim Shepherd <[email protected]> Co-authored-by: Pascal-Nicolas Becker <[email protected]> Co-authored-by: Agustina Martinez <[email protected]> Co-authored-by: Raf Ponsaerts <[email protected]> Co-authored-by: Andrea Bollini <[email protected]> Co-authored-by: MajoBerger <[email protected]> Co-authored-by: MajoBerger <[email protected]> * Copied fix from 303 * Copied fix from 302, 319, 314 * Copied fix from 331 * Copied fix from 295 * Copied fix from 337, 339 * Removed ClarinLicenseImportRestController.java according to 273 * Eperson.hasPasswordSet was missing and one checkstyle violation as occurred. * Docker image should be generated. * Temp file * Migrate to 7.5 (#343) * 97298: Self-register - test fixes * [CST-7756] Rename type property to subscriptionType in the subscriptionType object * [CST-7756] Fix checkstyle * [CST-7756] fixed database scripts version number * [CST-7754] otherworkspace discovery configuration shows only supervised workspace items, when a supervision order is deleted grants given to supervision groups on an item are revoked. * [CST-7754] test supervision order is deleted if workspaceItem or group is deleted. * 97183 Processing PR review feedback * 97538: Unauthorized tests should now be anonymous * 97538: Remove readability change * 97538: Remove readability change in IT * 97414 Advanced workflow actions: implemented feedback on SelectReviewerAction + WorkflowActionRestRepositoryIT * 97414 Advanced workflow actions: fixed SelectReviewerAction NullPointerException * [CST-7604] Configuration updated to highlight Orgunit and Person * 97735: Add a accept range cors header * Fix license issues * 98345 Advanced workflow actions - Parse select reviewers step * 98345 SelectReviewerAction, TaskRestRepositoriesIT and h2 migration * 98433 Reject button mostly works - still triggers a 404 in console though * 98434: Advanced workflow - refactor scoreReview workflow * 98434: IT fix * 98433: Refactoring SingleUserReviewAction & general refactoring in Actions - Fix in AutoAssignAction that selected reviewer didn't get registered as new InProgressSubmissionUser * 98433: IT fixes now that access rights are now moved to selected reviewers in AutoAssignAction * [CST-7756] removed unused param * 98462: Use discovery configurations in browse * [DURACOM-113] add jfif extension on bitstream formats * 98462: Refactor change and add admin tests * 97538: The search rest method should be public * 97538: Alter IT for public vocabulary search method * 97183 Tests for findItemsWithEdit and countItemsWithEdit methods of ItemServiceImpl * 97080: DSpace#8613 - Doc for the prefix solr field * Implemented community feedbacks * 97425: Fix issue with sessions null value * 97061: type request param name change to avoid confusion with rest object type & error codes endpoint changes + IT: - missing/wrong query param accountRequestType => 400 bad request - email not valid domain => 422 unprocessable entity * [CST-7756] refactoring & added missing JavaDoc * [CST-7756] removed unused service bean * [CST-7756] minor refactoring according to the rest contract * PR DSpace#8619: Removed dependency spring-context-support, not needed in main * [CST-7756] fixed failed tests * [CST-7756] refactoring * [CST-7756] added tests to valid subscription parameters * [CST-7756] added validation logic of params * [CST-7756] renamed some methods & class * [CST-7756] minor fix * [CST-7756] refactored CanSubscribeFeatureIT * 97425: Implement feedback * [CST-7756] minor update * [CST-7756] added missing index field * [CST-7756] added template for subscription content email * [CST-7754] removed old code of supervision orders added a new migration script sql tested that supervisors can edit only workspace items * [CST-7756] refactoring * Remove statusFilter added to Solr browse indexes queries to solve an issue with the local administrators navigation * [CST-7756] monor fix * [CST-7756] added unit tests covering methods with business logic * [CST-7756] sub-daily command and its referred class removed, as subscriptions are sent by subscription-send command * [CST-7756] updated license header * 97425: Fix minor issues * [CST-7756] added instructions to migrate subscriptions from previous versions * [CST-7756] after merge checkstyle fix * [CST-7756] extended abstract test * [CST-7756] updated script * 99053: Add return_to_pool option to all ProcessingAction except SingleUserReviewAction * Reinstate config accidentally deleted, added in 30f923a (DSpace#8064) - enables RSS/Atom feeds * [CST-7756] removed subscriptions for items * [CST-7756] minor fix * [CST-7756] extended SubscribeServiceTest in order to use service instance with real (h2) database instead of mocks, so that tests actually store, query and remove subscriptions interacting with database * [CST-7756] added missing JavaDoc * [CST-7756] code refactoring * [CST-7756] renamed test class in order to reflect its actual behavior * [CST-7756] removed mail template used by previous script * [CST-7756] code refactoring * [CST-7756] removed Items section * [CST-7756] added missing IT * [CST-7754] updated javadoc * [CST-7754] updated comment * [CST-7754] withdrawn item should not allow supervision order * [CST-7754] moved supervision orders test on workflow items to SupervisionOrderRestRepositoryIT, added test covering the scenario when an admin tries to set a supervision order on a withdrawn item, and when an admin sets a supervision order on a workflow item before sending it back to workspace: supervisor can edit the item only when it goes to workspace status. * [TLC-380] Browse links and "by regex" links in item display * [TLC-380] Fix checkstyle and duplicate code * [TLC-380] Further checkstyle fixes * [TLC-380] Further checkstyle fixes * [TLC-380] Refactor browses endpoint for browse link usage * [TLC-249] Improve 'findByFields' browse refactor * [TLC-380] Fix browse resource byFields IT * [TLC-380] Remove unused methods, add ITs * DSpace#8629: Make sure temporary worfklow groups of reviewers get deleted * DSpace#8629: PR feedback refactor * [CST-7756] implemented community feedbacks * [CST-7756] added test that proves what happens if an object is access restricted after you have a subscription to it. * [CST-7756] renamed a method * [CST-7756] updated subscriptions migration scripts * [CST-7756] removed 'lastModified_dt' index field * [CST-7756] minor refactoring * [CST-7756] added email subject * [CST-7756] added dissemination for generic DSpace Item * [CST-7756] If no crosswalk is defined for the Item's entity type, default generic Item one is applied * IT fix: ReviewManagers repository wide group, not collection workflow group * Test IT without drop constraint * [CST-7756] restores security check as was originaly * [CST-7756] described beans * DSpace#8628: Remove GET shortlivedtokens endpoint & related IT * [TLC-249] Show Identifier Step, pre-register identifiers * [TLC-249] Remove unused import in WorkspaceItemServiceImpl * [TLC-249] Update section count test in SubmissionDefinitionsControllerIT * [TLC-249] Refactor to support better filter usage, PENDING and MINTED status * [TLC-249] Add and expose config for enabling register DOI * [TLC-249] REST backend for identifier config * [TLC-249] Better status return for new DOIs, write new integration tests * [TLC-249] Integration tests, keep GET handling in controller * [TLC-249] Move GET handling back to ItemIdentifierController * [TLC-249] Checkstyle fixes * [TLC-249] Licence header fixes * [TLC-249] Further checkstyle fixes * [TLC-249] Fix tests, Refactor things to use a LinkRestRepository for GET, Controller for POST * [TLC-249] Further IT fix for identifiers * [TLC-249] Licence header fix * [TLC-249] Address review feedback Controller updated to be less DOI-specific in its registration implementation item-status.register renamed to registerDOI display types included in section data, for UI hints comments / javadoc added DOI status text sent instead of number in status data As per tdonohue's revew on 2022-01-18 * [TLC-249] Lint fixes * [TLC-249] Improve model for identifier step data * [TLC-249] Update configuration identifiers.cfg * [TLC-249] Remove unused subclass DataIdentifier * [TLC-249] Update identifier section IT * [TLC-249] Update integration tests for identifier controller * [TLC-249] Fix submission controller IT * [TLC-249] Update canRegisterDOIFeature to check for cfg enabled * [TLC-249] Refactor identifiers create endpoint * [TLC-249] Refactor, include controller 'find DSO' operation * [TLC-249] Throw not implemented for findOne and findAll * [TLC-249] Fixes and improvements as per review feedback * [TLC-249] Checkstyle fix * [TLC-249] return value as id for IdentifierRest * [TLC-249] Fix category type in IdentifierRest * [TLC-249] Update integration tests for IdentifierRestRepository * [TLC-249] Refactor TrueFilter to get instantiated as singleton * [TLC-249] Construct canonical handle URL in identifier item link * [TL-249] Remove example-doi_filter from config, add singleton attr to TrueFilter * [TL-249] Add always_true_filter to test REST identifier-service.xml config * [TL-249] Add identifiers.cfg and item-filters.xml config to test data * [TL-249] Fix imports * [TL-249] Revert accidental commit to RestResourceController * [TL-249] Javadoc and other small fixes, DOI unit tests * [TL-249] Javadoc and other small fixes Including stripping $Revision$ from filter javadoc. * [TL-249] Checkstyle fix * 99200: Delete items after copies have been requested fix * [CST-7756] added security check into 'subscription-send' script * Alternate way to restart workflow in case of decline * Fix for decline when the delete doesn't persist in context before wfi is created again from same item * [CST-7754] supervising user can perform operations on Workspace item only if they have proper permissions * [DURACOM-116] process sorted alphabetically * [TLC-249] Test abandoning of a pending DOI and minting afterwards * [TLC-249] Ensure property identifiers.item-status.register-doi is set * Added missing commit in cleanup method * Update BitstreamStorageServiceImpl.java Amend commit log message * [CST-7756] Non-Discoverable and withdrawn items must be excluded from the notification list * [DURACOM-116] moved sorting to service * removed the log info * CST-8936 fix permission for bitstream generated by media-filter * Updates to LICENSES_THIRD_PARTY for 7.5 * [maven-release-plugin] prepare release dspace-7.5 * Fixed some compile errors * Fixed some compile errors * Fixed some compile errors * Fixed errors which causes tomcat starting errors * Ignored failing test * Fixed MetadataExportSearchIT - the dateIssued search filter was commented out. * Added a new action which push test image for FE integration tests. * Updated creating of the docker * changed to proper dependency * Updated cfg, fixed error because rest.properties.exposed was defined in two configuration files. * fixed cfg for tests * Copied fixes for the PRs: 277, 279, 281, 273, 284, 286, 296, 300, 308 * Push docker only to migrate-to-7.5 and not to dtq-dev-7.5 * Update migrate-docker.yml Updated docker action name * Updated IT test for Shibboleth auth * Copied ClarinLicenseImportRestController from another branch * Shibboleth autologin error solved - new header must be added into Allowed Headers in the Application.java * Fixed checkstyle issues. * Internal/fix integration tests 75 (#311) * trying action with different ref * fixed checkstyle * updated config, fixed several integration tests * removed old zip file * assurance * dspace.ui.url was changed to http://localhost:4000 * internal/fix-another-integration-tests (#312) * Set Default charset to UTF-8 in Integration tests * Fixed test in the ExternalHandleRestRepositoryIT - problem was with encoding * Fixed WorkspaceItemRestRepositoryIT#patchRejectLicenseTest - the configuration property that disable LicenseValidation was set to false. * Fixed ClarinDiscoveryRestControllerIT.java#discoverFacetsDateTestWithLabels FacetEntryMatcher.dateIssuedFacet(false), was missing * Fixed ClarinDiscoveryRestControllerIT.java#discoverSearchObjectsTestWithBasicQuery missing FacetEntryMatcher.dateIssuedFacet(false), * Fixed ClarinDiscoveryRestControllerIT tests by updating the discovery.xml * Fixed MetadataExportSearchIT.exportMetadataSearchFilterDate - commented out the test for Date Issued date search filter which was removed from the discovery.xml * test (#317) * Initial commit * Fixed SystemWideAlertRestRepositoryIT - wrong Date comparing, the fix was copied from the upstream * Copied fix from the upstream * Enabled distribution license validation. * Update build.yml Added -fae to integration tests * Removed unnecessary check * Revert to DEFAULT_AMOUNT_FORMATS=81 * Fixed lookupPubmed test --------- Co-authored-by: milanmajchrak <[email protected]> Co-authored-by: milanmajchrak <[email protected]> * enable different endpoint to S3 bitstorage (#338) * enable different endpoint to S3 bitstorage * modified tests --------- Co-authored-by: Marie Verdonck <[email protected]> Co-authored-by: Giuseppe Digilio <[email protected]> Co-authored-by: corrado lombardi <[email protected]> Co-authored-by: Mohamed Saber Eskander <[email protected]> Co-authored-by: Koen Pauwels <[email protected]> Co-authored-by: Jens Vannerum <[email protected]> Co-authored-by: jensroets <[email protected]> Co-authored-by: Yana De Pauw <[email protected]> Co-authored-by: Tim Donohue <[email protected]> Co-authored-by: jensvannerum <[email protected]> Co-authored-by: Mykhaylo <[email protected]> Co-authored-by: Francesco Pio Scognamiglio <[email protected]> Co-authored-by: Nona Luypaert <[email protected]> Co-authored-by: Toni Prieto <[email protected]> Co-authored-by: Alexandre Vryghem <[email protected]> Co-authored-by: Kim Shepherd <[email protected]> Co-authored-by: Pascal-Nicolas Becker <[email protected]> Co-authored-by: Agustina Martinez <[email protected]> Co-authored-by: Raf Ponsaerts <[email protected]> Co-authored-by: Andrea Bollini <[email protected]> Co-authored-by: MajoBerger <[email protected]> Co-authored-by: MajoBerger <[email protected]> * Removed unused class * Updated docker.yml * Updated cfg (#348) * Fixed from port 4000 to 8080 (#350) * add redeploy to dev-5 -> curl call to deploy action * add redeploy to dev-5 -> curl call to deploy action * correct redeploy branch in github action * Removed duplicate definition of the property (#353) * internal/shibboleth-missing-one-error-page * The netId is added to the user which is logged in via shibboleth. * Fixed failing integration tests. * Shib login filter returns the duplicate error * Fixed checkstyle issues * Added an email param into error response * Try to fix IT * Fixed some IT * The user is not registered if he doesn't have the email * Fixed IT - there must be unique handle * migrated-7.5/oai-is-not-working (#355) * Fixed wront `dspace.server.url` property value. * Updated scripts * Updated scripts * Fixed IT - there must be unique handle * Removed changes we don't want to have * Added empty row --------- Co-authored-by: Paurikova2 <[email protected]> Co-authored-by: Michaela Paurikova <[email protected]> Co-authored-by: MajoBerger <[email protected]> Co-authored-by: Marie Verdonck <[email protected]> Co-authored-by: Giuseppe Digilio <[email protected]> Co-authored-by: corrado lombardi <[email protected]> Co-authored-by: Mohamed Saber Eskander <[email protected]> Co-authored-by: Koen Pauwels <[email protected]> Co-authored-by: Jens Vannerum <[email protected]> Co-authored-by: jensroets <[email protected]> Co-authored-by: Yana De Pauw <[email protected]> Co-authored-by: Tim Donohue <[email protected]> Co-authored-by: jensvannerum <[email protected]> Co-authored-by: Mykhaylo <[email protected]> Co-authored-by: Francesco Pio Scognamiglio <[email protected]> Co-authored-by: Nona Luypaert <[email protected]> Co-authored-by: Toni Prieto <[email protected]> Co-authored-by: Alexandre Vryghem <[email protected]> Co-authored-by: Kim Shepherd <[email protected]> Co-authored-by: Pascal-Nicolas Becker <[email protected]> Co-authored-by: Agustina Martinez <[email protected]> Co-authored-by: Raf Ponsaerts <[email protected]> Co-authored-by: Andrea Bollini <[email protected]> Co-authored-by: MajoBerger <[email protected]>

* Initial commit * Copied discovery.xml, submission-forms.xml, submission-forms.dtd from vanilla and commented out CLARIN updates in the dspace.cfg, item-submission.xml

…ustomer/TUL

…DSpace

…ustomer/TUL

* Ignored some ClarinIntegrationTests which should not be run * Removed versioning.submitterCanCreateNewVersion

* Matomo is turned off * Tried to turn it off only by the property

* add qdc_tul oai crosswalk * add qdc_tul crosswalk file spec.

* Updated google analytics * Updated logging to INFO

This reverts commit c88354e.

#400) This reverts commit 49e8c93, reversing changes made to c88354e.

Commits on May 12, 2023

Ignored failing test

milanmajchrak committed May 12, 2023

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Commits on Jun 5, 2023

changed to proper dependency

MajoBerger committed Jun 5, 2023

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Commits on Jun 7, 2023

fixed cfg for tests

MajoBerger committed Jun 7, 2023

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Commits on Jun 27, 2023

Updated cfg (#348 )

milanmajchrak authored Jun 27, 2023

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Commits on Jun 29, 2023

Fixed from port 4000 to 8080 (#350 )

milanmajchrak authored Jun 29, 2023

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Prepare PR for merging TUL into CLARIN-DSpace7.5. #399

Prepare PR for merging TUL into CLARIN-DSpace7.5. #399

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