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Merge pull request #91 from ttngu207/no-curation
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bugfix for catgt
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Thinh Nguyen authored Sep 14, 2022
2 parents 23ca7ca + 71d87ae commit 6757ef7
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1 change: 1 addition & 0 deletions element_array_ephys/readers/kilosort_triggering.py
Original file line number Diff line number Diff line change
Expand Up @@ -139,6 +139,7 @@ def generate_CatGT_input_json(self):
input_meta_path=input_meta_fullpath.as_posix(),
extracted_data_directory=self._ks_output_dir.as_posix(),
kilosort_output_directory=self._ks_output_dir.as_posix(),
kilosort_output_tmp=self._ks_output_dir.as_posix(),
kilosort_repository=_get_kilosort_repository(self._KS2ver),
**{k: v for k, v in catgt_params.items() if k in self._input_json_args}
)
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