LDMS implementation for runtime I/O collection #459
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Runtime Testing | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| test_runtime: | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest] | |
| python-version: ["3.10"] | |
| runs-on: ${{ matrix.platform }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get update -y | |
| sudo apt-get install -y hdf5-tools libhdf5-openmpi-dev openmpi-bin | |
| python -m pip install --upgrade pip | |
| python -m pip install --upgrade pytest mpi4py "cython<3.0.0" numpy wheel pkgconfig "setuptools<62.0.0" | |
| # we need to build h5py with the system HDF5 lib backend | |
| export HDF5_MPI="ON" | |
| # Install h5py https://github.com/h5py/h5py/issues/2222 | |
| CC=mpicc python -m pip install --no-cache-dir --no-binary=h5py h5py --no-build-isolation | |
| - name: Install darshan-runtime | |
| run: | | |
| export C_INCLUDE_PATH=$C_INCLUDE_PATH:/usr/include/hdf5/openmpi/ | |
| mkdir darshan_install | |
| export DARSHAN_INSTALL_PATH=$PWD/darshan_install | |
| git submodule update --init | |
| ./prepare.sh | |
| cd darshan-runtime | |
| mkdir build | |
| cd build | |
| CC=mpicc ../configure --prefix=$DARSHAN_INSTALL_PATH --with-log-path-by-env=DARSHAN_LOGPATH --with-jobid-env=NONE --enable-hdf5-mod | |
| make | |
| make install | |
| - name: Install darshan-runtime (non-MPI) | |
| run: | | |
| mkdir darshan_nonmpi_install | |
| export DARSHAN_INSTALL_PATH=$PWD/darshan_nonmpi_install | |
| cd darshan-runtime | |
| mkdir build_nonmpi | |
| cd build_nonmpi | |
| # Note that darshan-util is not needed here, we can use the one built below | |
| CC=gcc ../configure --disable-darshan-util --without-mpi --prefix=$DARSHAN_INSTALL_PATH --with-log-path-by-env=DARSHAN_LOGPATH --with-jobid-env=NONE | |
| make | |
| make install | |
| - name: Install darshan-util | |
| run: | | |
| export DARSHAN_INSTALL_PATH=$PWD/darshan_install | |
| cd darshan-util | |
| mkdir build | |
| cd build | |
| ../configure --prefix=$DARSHAN_INSTALL_PATH --enable-apxc-mod --enable-apmpi-mod | |
| make | |
| make install | |
| - name: Install pydarshan | |
| run: | | |
| cd darshan-util/pydarshan | |
| python -m pip install . | |
| - name: Test with pytest | |
| run: | | |
| export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$PWD/darshan_install/lib | |
| export DARSHAN_INSTALL_PATH=$PWD/darshan_install | |
| export DARSHAN_NONMPI_INSTALL_PATH=$PWD/darshan_nonmpi_install | |
| export DARSHAN_ROOT_PATH=$PWD | |
| export HDF5_LIB=/usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so | |
| python -m pytest darshan-test/python_runtime_tests.py |