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PlantCV v3.6.1

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@HaleySchuhl HaleySchuhl released this 11 Oct 16:14
15d38df

DOI

  • Add a new template for opening an issue for discussions, requesting a new feature, and for reporting an issue/requesting help.
  • Give more detail in documentation (how to change version of documentation, types of images compatible with workflow parallelization, example batch script for windows).
  • Updates to plantcv.analyze_color. Users are given the option to create histograms from data about all available colorspaces or just a subset but data was getting stored out for all channels regardless of the selected colorspace. Update so that only data requested gets saved out (since color frequency data is verbose).
  • Update method for plantcv.apply_mask to make it more robust to the types of data that can get masked.
  • Bugfix with plantcv.cluster_contours to allow number of row and/or columns to exceed 9.
  • Update method for plantcv.roi_objects since the old algorithm fails when a ROI is small enough to be fully enclosed by a contour.
  • Bugfix for the sorting algorithm within plantcv.morphology.segment_insertion_angle since it was overly sensitive.
  • Update docker.