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Merge branch 'master' into update-4x
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nfahlgren committed May 11, 2021
2 parents 3a7beec + f100b41 commit 78cb01d
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Showing 2 changed files with 3 additions and 3 deletions.
4 changes: 2 additions & 2 deletions plantcv/plantcv/cluster_contours.py
Original file line number Diff line number Diff line change
Expand Up @@ -49,13 +49,13 @@ def cluster_contours(img, roi_objects, roi_obj_hierarchy, nrow=1, ncol=1, show_g
rbreaks = [0, iy]
else:
rstep = np.rint(iy / nrow)
rstep1 = np.int(rstep)
rstep1 = int(rstep)
rbreaks = range(0, iy, rstep1)
if ncol == 1:
cbreaks = [0, ix]
else:
cstep = np.rint(ix / ncol)
cstep1 = np.int(cstep)
cstep1 = int(cstep)
cbreaks = range(0, ix, cstep1)

# categorize what bin the center of mass of each contour
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2 changes: 1 addition & 1 deletion plantcv/plantcv/visualize/pseudocolor.py
Original file line number Diff line number Diff line change
Expand Up @@ -105,7 +105,7 @@ def pseudocolor(gray_img, obj=None, mask=None, cmap=None, background="image", mi
value=(0, 0, 0))

# Apply the mask
masked_img = np.ma.array(gray_img1, mask=~mask.astype(np.bool))
masked_img = np.ma.array(gray_img1, mask=~mask.astype(bool))

# Set the background color or type
if background.upper() == "BLACK":
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