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Update docs to generalize from DANDI Archive
to DANDI instance
#1548
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Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## master #1548 +/- ##
==========================================
+ Coverage 88.44% 88.57% +0.13%
==========================================
Files 78 78
Lines 10742 10742
==========================================
+ Hits 9501 9515 +14
+ Misses 1241 1227 -14
Flags with carried forward coverage won't be shown. Click here to find out more. ☔ View full report in Codecov by Sentry. |
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This is great! See some minor comments, but major thing I think is to look either to make testing there more flexible (allow for regex matching?) or just remove those changes from this PR and coordinate later with similar changes to dandi-archive
@@ -13,13 +13,13 @@ | |||
], | |||
"version": "draft", | |||
"@context": "https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.4/context.json", | |||
"citation": "Aguillon-Rodriguez, Valeria; Angelaki, Dora E.; Bayer, Hannah M.; Bonacchi, Niccol\u00f2; Carandini, Matteo; Cazettes, Fanny; Chapuis, Gaelle A.; Churchland, Anne K.; Dan, Yang; Dewitt, Eric E. J.; Faulkner, Mayo; Forrest, Hamish; Haetzel, Laura M.; Hausser, Michael; Hofer, Sonja B.; Hu, Fei; Khanal, Anup; Krasniak, Christopher S.; Laranjeira, In\u00eas; Mainen, Zachary F.; Meijer, Guido T.; Miska, Nathaniel J.; Mrsic-Flogel, Thomas D.; Murakami, Masayoshi; Noel, Jean-Paul; Pan-Vazquez, Alejandro; Rossant, Cyrille; Sanders, Joshua I.; Socha, Karolina Z.; Terry, Rebecca; Urai, Anne E.; Vergara, Hernando M.; Wells, Miles J.; Wilson, Christian J.; Witten, Ilana B.; Wool, Lauren E.; Zador, Anthony (2023) Standardized and reproducible measurement of decision-making in mice (Version draft) [Data set]. DANDI archive. http://localhost:8085/dandiset/000001/draft", | |||
"citation": "Aguillon-Rodriguez, Valeria; Angelaki, Dora E.; Bayer, Hannah M.; Bonacchi, Niccol\u00f2; Carandini, Matteo; Cazettes, Fanny; Chapuis, Gaelle A.; Churchland, Anne K.; Dan, Yang; Dewitt, Eric E. J.; Faulkner, Mayo; Forrest, Hamish; Haetzel, Laura M.; Hausser, Michael; Hofer, Sonja B.; Hu, Fei; Khanal, Anup; Krasniak, Christopher S.; Laranjeira, In\u00eas; Mainen, Zachary F.; Meijer, Guido T.; Miska, Nathaniel J.; Mrsic-Flogel, Thomas D.; Murakami, Masayoshi; Noel, Jean-Paul; Pan-Vazquez, Alejandro; Rossant, Cyrille; Sanders, Joshua I.; Socha, Karolina Z.; Terry, Rebecca; Urai, Anne E.; Vergara, Hernando M.; Wells, Miles J.; Wilson, Christian J.; Witten, Ilana B.; Wool, Lauren E.; Zador, Anthony (2023) Standardized and reproducible measurement of decision-making in mice (Version draft) [Data set]. DANDI Archive. http://localhost:8085/dandiset/000001/draft", |
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those are coming from dandi-archive
❯ git grep 'DANDI archive'
dandiapi/api/models/version.py: citation = f'{name} ({year}). (Version {version}) [Data set]. DANDI archive. {url}'
dandiapi/api/models/version.py: f'{cl} ({year}) {name} (Version {version}) [Data set]. DANDI archive. {url}'
...
there should be a "satellite" PR there to likely preceed these changes or we should improve testing here to allow for flexibility (didn't look ATM) but these are the cause of failing tests ATM e.g. https://github.com/dandi/dandi-cli/actions/runs/12262974763/job/34213512790?pr=1548#step:8:25905
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do you think you could remove those changes in the tests for now so we could not delay accepting major portion of the changes @kabilar to not breed conflicts etc?
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Hi @yarikoptic, I just created dandi/dandi-archive#2114.
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it was merged now, so we should be all set here. I will retrigger tests to see if all good (frankly I don't remember if we need release of archive first) and then we could proceed
Co-authored-by: Yaroslav Halchenko <[email protected]>
Co-authored-by: Yaroslav Halchenko <[email protected]>
oh that codecov codecov/patch — 0.00% of diff hit (target 88.44%) ;-) |
🚀 PR was released in |
DANDI instances, such as the DANDI Archive
Dandi
toDANDI
DANDI archive
toDANDI Archive
DANDI Archive instances
toDANDI instances
cc @aaronkanzer