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👷 Change build and run analysis conditions #10

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👷 Change build and run analysis conditions

👷 Change build and run analysis conditions #10

Triggered via pull request October 6, 2023 19:37
@devbyaccidentdevbyaccident
synchronize #445
feature/cbl/add-docker-condition
Status Failure
Total duration 2m 31s
Artifacts –

run_analysis.yml

on: pull_request
Build and Publish Image
1m 54s
Build and Publish Image
Matrix: Run Analysis
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24 errors and 48 warnings
Run Analysis (Molecular Subtyping - CRANIO, molecular-subtyping-CRANIO/run-molecular-subtyping-cr...
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - EMBRYONAL, molecular-subtyping-embryonal/run-embryonal-subtyp...
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - EWS, molecular-subtyping-EWS/run_subtyping.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - ATRT, molecular-subtyping-ATRT/run-molecular-subtyping-ATRT.sh)
Docker pull failed with exit code 1
Run Analysis (TP53/NF1 scores, tp53_nf1_score/run_classifier.sh, 0)
Docker pull failed with exit code 1
Run Analysis (Independent Specimens pre-release, independent-samples/run-independent-samples.sh, 1)
Docker pull failed with exit code 1
Run Analysis (Fusion summary, fusion-summary/run-new-analysis.sh, 0)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - NBL, molecular-subtyping-NBL/run-molecular-subtyping-NBL.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - EPN, molecular-subtyping-EPN/run-molecular-subtyping-EPN.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - INTEGRATE (+ add cancer groups), molecular-subtyping-integrat...
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - NEUROCYTOMA, molecular-subtyping-neurocytoma/run_subtyping.sh)
Docker pull failed with exit code 1
Run Analysis (Consensus CN annotation, focal-cn-file-preparation/run-prepare-cn.sh, 1)
Docker pull failed with exit code 1
Run Analysis (ENSEMBL Gene matching, gene_match/run-gene-mapping.sh)
Docker pull failed with exit code 1
Run Analysis (Independent Specimens, independent-samples/run-independent-samples.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - MB, molecular-subtyping-MB/run-molecular-subtyping-mb.sh, 0)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - LGG, molecular-subtyping-LGAT/run_subtyping.sh, 0)
Docker pull failed with exit code 1
Run Analysis (Consensus CN, copy_number_consensus_call/run_consensus_call.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - HGG, molecular-subtyping-HGG/run-molecular-subtyping-HGG.sh)
Docker pull failed with exit code 1
Run Analysis (TMB calculation, tmb-calculation/run_tmb_calculation.sh)
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - PATHOLOGY/COMPILE, molecular-subtyping-pathology/run-subtypin...
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - CHORDOMA, molecular-subtyping-chordoma/run-molecular-subtypin...
Docker pull failed with exit code 1
Run Analysis (Consensus CN Manta, copy_number_consensus_call_manta/run_consensus_call.sh)
Docker pull failed with exit code 1
Run Analysis (Fusion filtering, fusion_filtering/run_fusion_merged.sh)
Docker pull failed with exit code 1
Run Analysis (RNA-Seq Expression Summary stats, rna-seq-expression-summary-stats/run-rna-seq-expr...
Docker pull failed with exit code 1
Run Analysis (Molecular Subtyping - CRANIO, molecular-subtyping-CRANIO/run-molecular-subtyping-cr...
Docker pull failed with exit code 1, back off 3.349 seconds before retry.
Run Analysis (Molecular Subtyping - CRANIO, molecular-subtyping-CRANIO/run-molecular-subtyping-cr...
Docker pull failed with exit code 1, back off 3.693 seconds before retry.
Run Analysis (Molecular Subtyping - EMBRYONAL, molecular-subtyping-embryonal/run-embryonal-subtyp...
Docker pull failed with exit code 1, back off 2.29 seconds before retry.
Run Analysis (Molecular Subtyping - EMBRYONAL, molecular-subtyping-embryonal/run-embryonal-subtyp...
Docker pull failed with exit code 1, back off 2.951 seconds before retry.
Run Analysis (Molecular Subtyping - EWS, molecular-subtyping-EWS/run_subtyping.sh)
Docker pull failed with exit code 1, back off 1.322 seconds before retry.
Run Analysis (Molecular Subtyping - EWS, molecular-subtyping-EWS/run_subtyping.sh)
Docker pull failed with exit code 1, back off 4.348 seconds before retry.
Run Analysis (TP53/NF1 scores, tp53_nf1_score/run_classifier.sh, 0)
Docker pull failed with exit code 1, back off 4.476 seconds before retry.
Run Analysis (TP53/NF1 scores, tp53_nf1_score/run_classifier.sh, 0)
Docker pull failed with exit code 1, back off 2.395 seconds before retry.
Run Analysis (Molecular Subtyping - ATRT, molecular-subtyping-ATRT/run-molecular-subtyping-ATRT.sh)
Docker pull failed with exit code 1, back off 2.419 seconds before retry.
Run Analysis (Molecular Subtyping - ATRT, molecular-subtyping-ATRT/run-molecular-subtyping-ATRT.sh)
Docker pull failed with exit code 1, back off 5.218 seconds before retry.
Run Analysis (Independent Specimens pre-release, independent-samples/run-independent-samples.sh, 1)
Docker pull failed with exit code 1, back off 5.002 seconds before retry.
Run Analysis (Independent Specimens pre-release, independent-samples/run-independent-samples.sh, 1)
Docker pull failed with exit code 1, back off 1.297 seconds before retry.
Run Analysis (Fusion summary, fusion-summary/run-new-analysis.sh, 0)
Docker pull failed with exit code 1, back off 5.143 seconds before retry.
Run Analysis (Fusion summary, fusion-summary/run-new-analysis.sh, 0)
Docker pull failed with exit code 1, back off 2.772 seconds before retry.
Run Analysis (Molecular Subtyping - NBL, molecular-subtyping-NBL/run-molecular-subtyping-NBL.sh)
Docker pull failed with exit code 1, back off 3.3 seconds before retry.
Run Analysis (Molecular Subtyping - NBL, molecular-subtyping-NBL/run-molecular-subtyping-NBL.sh)
Docker pull failed with exit code 1, back off 4.561 seconds before retry.
Run Analysis (Molecular Subtyping - EPN, molecular-subtyping-EPN/run-molecular-subtyping-EPN.sh)
Docker pull failed with exit code 1, back off 2.475 seconds before retry.
Run Analysis (Molecular Subtyping - EPN, molecular-subtyping-EPN/run-molecular-subtyping-EPN.sh)
Docker pull failed with exit code 1, back off 3.574 seconds before retry.
Run Analysis (Molecular Subtyping - INTEGRATE (+ add cancer groups), molecular-subtyping-integrat...
Docker pull failed with exit code 1, back off 1.939 seconds before retry.
Run Analysis (Molecular Subtyping - INTEGRATE (+ add cancer groups), molecular-subtyping-integrat...
Docker pull failed with exit code 1, back off 9.282 seconds before retry.
Run Analysis (Molecular Subtyping - NEUROCYTOMA, molecular-subtyping-neurocytoma/run_subtyping.sh)
Docker pull failed with exit code 1, back off 3.31 seconds before retry.
Run Analysis (Molecular Subtyping - NEUROCYTOMA, molecular-subtyping-neurocytoma/run_subtyping.sh)
Docker pull failed with exit code 1, back off 4.831 seconds before retry.
Run Analysis (Consensus CN annotation, focal-cn-file-preparation/run-prepare-cn.sh, 1)
Docker pull failed with exit code 1, back off 4.715 seconds before retry.
Run Analysis (Consensus CN annotation, focal-cn-file-preparation/run-prepare-cn.sh, 1)
Docker pull failed with exit code 1, back off 6.057 seconds before retry.
Run Analysis (ENSEMBL Gene matching, gene_match/run-gene-mapping.sh)
Docker pull failed with exit code 1, back off 7.287 seconds before retry.
Run Analysis (ENSEMBL Gene matching, gene_match/run-gene-mapping.sh)
Docker pull failed with exit code 1, back off 4.506 seconds before retry.
Run Analysis (Independent Specimens, independent-samples/run-independent-samples.sh)
Docker pull failed with exit code 1, back off 1.492 seconds before retry.
Run Analysis (Independent Specimens, independent-samples/run-independent-samples.sh)
Docker pull failed with exit code 1, back off 5.869 seconds before retry.
Run Analysis (Molecular Subtyping - MB, molecular-subtyping-MB/run-molecular-subtyping-mb.sh, 0)
Docker pull failed with exit code 1, back off 4.513 seconds before retry.
Run Analysis (Molecular Subtyping - MB, molecular-subtyping-MB/run-molecular-subtyping-mb.sh, 0)
Docker pull failed with exit code 1, back off 5.648 seconds before retry.
Run Analysis (Molecular Subtyping - LGG, molecular-subtyping-LGAT/run_subtyping.sh, 0)
Docker pull failed with exit code 1, back off 8.361 seconds before retry.
Run Analysis (Molecular Subtyping - LGG, molecular-subtyping-LGAT/run_subtyping.sh, 0)
Docker pull failed with exit code 1, back off 1.158 seconds before retry.
Run Analysis (Consensus CN, copy_number_consensus_call/run_consensus_call.sh)
Docker pull failed with exit code 1, back off 8.557 seconds before retry.
Run Analysis (Consensus CN, copy_number_consensus_call/run_consensus_call.sh)
Docker pull failed with exit code 1, back off 5.795 seconds before retry.
Run Analysis (Molecular Subtyping - HGG, molecular-subtyping-HGG/run-molecular-subtyping-HGG.sh)
Docker pull failed with exit code 1, back off 9.451 seconds before retry.
Run Analysis (Molecular Subtyping - HGG, molecular-subtyping-HGG/run-molecular-subtyping-HGG.sh)
Docker pull failed with exit code 1, back off 3.461 seconds before retry.
Run Analysis (TMB calculation, tmb-calculation/run_tmb_calculation.sh)
Docker pull failed with exit code 1, back off 4.408 seconds before retry.
Run Analysis (TMB calculation, tmb-calculation/run_tmb_calculation.sh)
Docker pull failed with exit code 1, back off 4.995 seconds before retry.
Run Analysis (Molecular Subtyping - PATHOLOGY/COMPILE, molecular-subtyping-pathology/run-subtypin...
Docker pull failed with exit code 1, back off 6.213 seconds before retry.
Run Analysis (Molecular Subtyping - PATHOLOGY/COMPILE, molecular-subtyping-pathology/run-subtypin...
Docker pull failed with exit code 1, back off 4.747 seconds before retry.
Run Analysis (Molecular Subtyping - CHORDOMA, molecular-subtyping-chordoma/run-molecular-subtypin...
Docker pull failed with exit code 1, back off 8.9 seconds before retry.
Run Analysis (Molecular Subtyping - CHORDOMA, molecular-subtyping-chordoma/run-molecular-subtypin...
Docker pull failed with exit code 1, back off 4.532 seconds before retry.
Run Analysis (Consensus CN Manta, copy_number_consensus_call_manta/run_consensus_call.sh)
Docker pull failed with exit code 1, back off 7.554 seconds before retry.
Run Analysis (Fusion filtering, fusion_filtering/run_fusion_merged.sh)
Docker pull failed with exit code 1, back off 7.929 seconds before retry.
Run Analysis (Consensus CN Manta, copy_number_consensus_call_manta/run_consensus_call.sh)
Docker pull failed with exit code 1, back off 6.397 seconds before retry.
Run Analysis (Fusion filtering, fusion_filtering/run_fusion_merged.sh)
Docker pull failed with exit code 1, back off 8.245 seconds before retry.
Run Analysis (RNA-Seq Expression Summary stats, rna-seq-expression-summary-stats/run-rna-seq-expr...
Docker pull failed with exit code 1, back off 4.99 seconds before retry.
Run Analysis (RNA-Seq Expression Summary stats, rna-seq-expression-summary-stats/run-rna-seq-expr...
Docker pull failed with exit code 1, back off 9.51 seconds before retry.