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Implemented Time Series Analysis#526

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RogerAK wants to merge 56 commits intodevcschlaffner/PROTzilla2:devfrom bachelor-thesis-kuganashcschlaffner/PROTzilla2:bachelor-thesis-kuganashCopy head branch name to clipboard

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Commits

Commits on Jun 21, 2024

• Fixed import for circadian mouse data

  RogerAK

  committed
  ae8a7b3

Commits on Jul 2, 2024

• Plotquantplot for peptide

  RogerAK

  committed
  53d6baf

• Merge branch 'refs/heads/dev' into bachelor-thesis-kuganash

  Show description for b446181
  RogerAK

  committed
  b446181

Commits on Jul 10, 2024

• Plotquantplot for peptide

  RogerAK

  committed
  786da45

• Merge branch 'refs/heads/dev' into bachelor-thesis-kuganash

  RogerAK

  committed
  cdcb739

• updated transform_dfs.py so that it supports peptide DFs

  RogerAK

  committed
  dc9fc74

• updated transform_dfs.py so that it supports peptide DFs

  RogerAK

  committed
  286023d

• Implemeted Protquantplot with retention time instead of Intensities

  RogerAK

  committed
  4b940f0

Commits on Jul 11, 2024

• Implemeted Timequantplot

  RogerAK

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  3d2bb30

• Renamed the plot to time series plot

  RogerAK

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  468ac23

• Fixed Tests

  RogerAK

  committed
  8a419b2

• Implemented test for time series plot

  RogerAK

  committed
  61b6df8

Commits on Jul 18, 2024

• Implemented time series regression analysis

  RogerAK

  committed
  935f0b6

• Merge branch 'refs/heads/dev' into bachelor-thesis-kuganash

  Show description for 9434b72
  RogerAK

  committed
  9434b72

Commits on Jul 19, 2024

• Implemented time series regression analysis

  RogerAK

  committed
  de89b56

• Added Docstrings

  RogerAK

  committed
  97ace4a

• Implemented tests

  RogerAK

  committed
  38eb985

• Implemented tests

  RogerAK

  committed
  d752225

• made some minor changes

  RogerAK

  committed
  47556f3

Commits on Jul 24, 2024

• Implemented RANSAC regression

  RogerAK

  committed
  4f8737d

• output field for result

  

  selenabr

  authored and

  RogerAK

  committed
  c3fae9b

• further implementation of output field for result

  

  selenabr

  authored and

  RogerAK

  committed
  67c59c7

• display display_output in output field

  

  selenabr

  authored and

  RogerAK

  committed
  20b5e69

• display_output field displayed in the same size and position as the other fields

  

  selenabr

  authored and

  RogerAK

  committed
  3aa711d

Commits on Jul 25, 2024

• Changed is_dynamic to True

  RogerAK

  committed
  2b483f9

• Made some minor changes to the Plot positioning

  RogerAK

  committed
  5553ca7

• Made some minor changes to the Plot positioning

  RogerAK

  committed
  14dac5e

• Created a thesis Workflow and added some tests for RANSAC

  RogerAK

  committed
  e9c9acf

• Implemented Augmented Dickey-Fuller test to check if a time series data stationary or not

  RogerAK

  committed
  37180af

Commits on Jul 31, 2024

• Implemented the option to do regression on each group

  

  henninggaertner

  authored and

  RogerAK

  committed
  21468fc

• Cherry picked Text Field from Henning's BA

  RogerAK

  committed
  0153a1a

• Added info box for ADFuller Test

  RogerAK

  committed
  31bd7af

Commits on Aug 1, 2024

• Fixed Tests

  RogerAK

  committed
  fb476e4

• implemented Auto ARIMA

  RogerAK

  committed
  f7da4aa

Commits on Aug 8, 2024

• implemented Auto ARIMA

  RogerAK

  committed
  2e22aa6

• implemented ARIMA

  RogerAK

  committed
  82a550a

• Fixed RANSAC tests

  RogerAK

  committed
  5c0c157

Commits on Aug 14, 2024

• Updated ARIMA so that it supports seasonal parameters

  RogerAK

  committed
  0b54ee8

Commits on Aug 15, 2024

• Corrected the output text for the scores

  RogerAK

  committed
  e1b77dc

• Implemented tests for auto ARIMA and ARIMA

  RogerAK

  committed
  d89b236

• Merge branch 'refs/heads/dev' into bachelor-thesis-kuganash

  Show description for dfcbcbb
  RogerAK

  committed
  dfcbcbb

Commits on Aug 18, 2024

• Implemented a dynamic field where the user can select the time column and the group column in each time series methods

  RogerAK

  committed
  ec9b783

• Fixed Tests

  RogerAK

  committed
  4059f58

Commits on Sep 5, 2024

• Fixed Time Series Analysis

  RogerAK

  committed
  9f624f8

Commits on Sep 14, 2024

• Implemented TMT data import for PROTzilla

  RogerAK

  committed
  671633d

• Updated TimeQuant plot

  RogerAK

  committed
  1e1b50f

• Updated a test

  RogerAK

  committed
  a3ffe29

• Mapped TMT import

  RogerAK

  committed
  7762995

• Added an option for the user to select the Time and Grouping column names

  RogerAK

  committed
  aaeed09

• Resolved some comments from from Hendrik

  RogerAK

  committed
  25c37d6

Commits on Sep 15, 2024

• Fixed Tests

  RogerAK

  committed
  f8b556c

• Updated a variable name

  RogerAK

  committed
  58ec156

Commits on Sep 24, 2024

• Updated some methods

  RogerAK

  committed
  8dda742

• Updated Test

  RogerAK

  committed
  0e20447

Commits on Sep 27, 2024

• Removed unwanted lines

  RogerAK

  committed
  f3b00e3

• Fixed Tests

  RogerAK

  committed
  f8bab05