sync

cran4linux · Oct 30, 2024 · 8ba9458 · 8ba9458
1 parent 326f46f
commit 8ba9458
Show file tree

Hide file tree

Showing 38 changed files with 457 additions and 139 deletions.
diff --git a/specs/R-CRAN-Directional.spec b/specs/R-CRAN-Directional.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  Directional
-%global packver   6.8
+%global packver   6.9
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          6.8
+Version:          6.9
 Release:          1%{?dist}%{?buildtag}
 Summary:          A Collection of Functions for Directional Data Analysis
 
@@ -50,7 +50,7 @@ with millions of observations) analysis. Hypothesis testing, discriminant
 and regression analysis, MLE of distributions and more are included. The
 standard textbook for such data is the "Directional Statistics" by Mardia,
 K. V. and Jupp, P. E. (2000). Other references include a) Phillip J.
-Paine, Simon P. Preston Michail Tsagris and Andrew T. A. Wood (2018). "An
+Paine, Simon P. Preston, Michail Tsagris and Andrew T. A. Wood (2018). "An
 elliptically symmetric angular Gaussian distribution". Statistics and
 Computing 28(3): 689-697. <doi:10.1007/s11222-017-9756-4>. b) Tsagris M.
 and Alenazi A. (2019). "Comparison of discriminant analysis methods on the
@@ -62,15 +62,16 @@ Statistics and Computing 30(1): 153--165.
 <doi:10.1007/s11222-019-09872-2>. d) Tsagris M. and Alenazi A. (2024). "An
 investigation of hypothesis testing procedures for circular and spherical
 mean vectors". Communications in Statistics-Simulation and Computation,
-53(3): 1387--1408. <doi:10.1080/03610918.2022.2045499>. e) Tsagris M. and
-Alzeley O. (2023). "Circular and spherical projected Cauchy distributions:
-A Novel Framework for Circular and Directional Data Modeling".
-<doi:10.48550/arXiv.2302.02468>. f) Zehao Yu and Xianzheng Huang (2024). A
-new parameterization for elliptically symmetric angular Gaussian
-distributions of arbitrary dimension. Electronic Journal of Statistics,
-18(1): 301--334. <doi:10.1214/23-EJS2210>. g) Tsagris M. (2024).
-"Directional data analysis using the spherical Cauchy and the
-Poisson-kernel based distribution". <doi:10.48550/arXiv.2409.03292>.
+53(3): 1387--1408. <doi:10.1080/03610918.2022.2045499>. e) Zehao Yu and
+Xianzheng Huang (2024). A new parameterization for elliptically symmetric
+angular Gaussian distributions of arbitrary dimension. Electronic Journal
+of Statistics, 18(1): 301--334. <doi:10.1214/23-EJS2210>. f) Tsagris M.
+and Alzeley O. (2024). "Circular and spherical projected Cauchy
+distributions: A Novel Framework for Circular and Directional Data
+Modeling". <doi:10.48550/arXiv.2302.02468>. g) Tsagris M. and
+Papastamoulis P. (2024). "Directional data analysis using the spherical
+Cauchy and the Poisson kernel-based distribution".
+<doi:10.48550/arXiv.2409.03292>.
 
 %prep
 %setup -q -c -n %{packname}

diff --git a/specs/R-CRAN-DisaggregateTS.spec b/specs/R-CRAN-DisaggregateTS.spec
@@ -1,41 +1,43 @@
 %global __brp_check_rpaths %{nil}
+%global __requires_exclude ^libmpi
 %global packname  DisaggregateTS
-%global packver   2.0.0
+%global packver   3.0.0
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          2.0.0
+Version:          3.0.0
 Release:          1%{?dist}%{?buildtag}
 Summary:          High-Dimensional Temporal Disaggregation
 
-License:          GPL (>= 3)
+License:          GPL-3
 URL:              https://cran.r-project.org/package=%{packname}
 Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
 
 
-BuildRequires:    R-devel
-Requires:         R-core
+BuildRequires:    R-devel >= 3.5.0
+Requires:         R-core >= 3.5.0
 BuildArch:        noarch
 BuildRequires:    R-CRAN-Rdpack 
-BuildRequires:    R-CRAN-zoo 
-BuildRequires:    R-CRAN-lars 
+BuildRequires:    R-stats 
 BuildRequires:    R-CRAN-Matrix 
+BuildRequires:    R-CRAN-lars 
+BuildRequires:    R-CRAN-zoo 
 BuildRequires:    R-CRAN-withr 
 Requires:         R-CRAN-Rdpack 
-Requires:         R-CRAN-zoo 
-Requires:         R-CRAN-lars 
+Requires:         R-stats 
 Requires:         R-CRAN-Matrix 
+Requires:         R-CRAN-lars 
+Requires:         R-CRAN-zoo 
 Requires:         R-CRAN-withr 
 
 %description
-First - Generates (potentially high-dimensional) high-frequency and
-low-frequency series for simulation studies in temporal disaggregation;
-Second - a toolkit utilizing temporal disaggregation and benchmarking
-techniques with a low-dimensional matrix of indicator series previously
-proposed in Dagum and Cholette (2006, ISBN:978-0-387-35439-2) ; and Third
-- novel techniques proposed by Mosley, Gibberd and Eckley (2021)
-<arXiv:2108.05783> for disaggregating low-frequency series in the presence
-of high-dimensional indicator matrices.
+Provides tools for temporal disaggregation, including: (1)
+High-dimensional and low-dimensional series generation for simulation
+studies; (2) A toolkit for temporal disaggregation and benchmarking using
+low-dimensional indicator series as proposed by Dagum and Cholette (2006,
+ISBN:978-0-387-35439-2); (3) Novel techniques by Mosley, Gibberd, and
+Eckley (2022, <doi:10.1111/rssa.12952>) for disaggregating low-frequency
+series in the presence of high-dimensional indicator matrices.
 
 %prep
 %setup -q -c -n %{packname}

diff --git a/specs/R-CRAN-ECG.spec b/specs/R-CRAN-ECG.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  ECG
-%global packver   0.5.1
+%global packver   0.5.2
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          0.5.1
+Version:          0.5.2
 Release:          1%{?dist}%{?buildtag}
 Summary:          Center of Gravity Methods
 

diff --git a/specs/R-CRAN-FinNet.spec b/specs/R-CRAN-FinNet.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  FinNet
-%global packver   0.1.2
+%global packver   0.2
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          0.1.2
+Version:          0.2
 Release:          1%{?dist}%{?buildtag}
 Summary:          Quickly Build and Manipulate Financial Networks
 
@@ -16,13 +16,14 @@ Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
 
 BuildRequires:    R-devel >= 2.10
 Requires:         R-core >= 2.10
-BuildArch:        noarch
 BuildRequires:    R-CRAN-Matrix 
 BuildRequires:    R-grDevices 
 BuildRequires:    R-methods 
+BuildRequires:    R-CRAN-Rcpp 
 Requires:         R-CRAN-Matrix 
 Requires:         R-grDevices 
 Requires:         R-methods 
+Requires:         R-CRAN-Rcpp 
 
 %description
 Providing classes, methods, and functions to deal with financial networks.
@@ -33,7 +34,9 @@ creating various types of financial networks depending on the type of
 relation between its units depending on the relation under scrutiny
 (ownership, board interlocks, etc.), the desired tie type (valued or
 binary), and renders them in the most common formats (adjacency matrix,
-incidence matrix, edge list, 'igraph', 'network').
+incidence matrix, edge list, 'igraph', 'network'). There are also ad-hoc
+functions for the Fiedler value, global network efficiency, and
+cascade-failure analysis.
 
 %prep
 %setup -q -c -n %{packname}

diff --git a/specs/R-CRAN-MCARtest.spec b/specs/R-CRAN-MCARtest.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  MCARtest
-%global packver   1.2.1
+%global packver   1.2.2
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          1.2.1
+Version:          1.2.2
 Release:          1%{?dist}%{?buildtag}
 Summary:          Optimal Nonparametric Testing of Missing Completely at Random
 
@@ -26,7 +26,6 @@ BuildRequires:    R-CRAN-pracma
 BuildRequires:    R-CRAN-highs 
 BuildRequires:    R-CRAN-Matrix 
 BuildRequires:    R-CRAN-Rcsdp 
-BuildRequires:    R-CRAN-misty 
 BuildRequires:    R-CRAN-norm 
 BuildRequires:    R-CRAN-missMethods 
 BuildRequires:    R-CRAN-copula 
@@ -41,7 +40,6 @@ Requires:         R-CRAN-pracma
 Requires:         R-CRAN-highs 
 Requires:         R-CRAN-Matrix 
 Requires:         R-CRAN-Rcsdp 
-Requires:         R-CRAN-misty 
 Requires:         R-CRAN-norm 
 Requires:         R-CRAN-missMethods 
 Requires:         R-CRAN-copula 

diff --git a/specs/R-CRAN-PublicWorksFinanceIT.spec b/specs/R-CRAN-PublicWorksFinanceIT.spec
@@ -0,0 +1,87 @@
+%global __brp_check_rpaths %{nil}
+%global __requires_exclude ^libmpi
+%global packname  PublicWorksFinanceIT
+%global packver   0.3.0
+%global rlibdir   /usr/local/lib/R/library
+
+Name:             R-CRAN-%{packname}
+Version:          0.3.0
+Release:          1%{?dist}%{?buildtag}
+Summary:          Soil Defense Investments in Italy: Data Retrieval, Analysis, Visualization
+
+License:          GPL (>= 3)
+URL:              https://cran.r-project.org/package=%{packname}
+Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
+
+
+BuildRequires:    R-devel
+Requires:         R-core
+BuildArch:        noarch
+BuildRequires:    R-CRAN-magrittr 
+BuildRequires:    R-CRAN-dplyr 
+BuildRequires:    R-CRAN-ggplot2 
+BuildRequires:    R-CRAN-httr 
+BuildRequires:    R-CRAN-leaflet 
+BuildRequires:    R-CRAN-lubridate 
+BuildRequires:    R-CRAN-rlang 
+BuildRequires:    R-CRAN-rvest 
+BuildRequires:    R-CRAN-scales 
+BuildRequires:    R-CRAN-sf 
+BuildRequires:    R-CRAN-tibble 
+BuildRequires:    R-CRAN-tidyr 
+BuildRequires:    R-CRAN-plotly 
+BuildRequires:    R-CRAN-spdep 
+BuildRequires:    R-CRAN-knitr 
+Requires:         R-CRAN-magrittr 
+Requires:         R-CRAN-dplyr 
+Requires:         R-CRAN-ggplot2 
+Requires:         R-CRAN-httr 
+Requires:         R-CRAN-leaflet 
+Requires:         R-CRAN-lubridate 
+Requires:         R-CRAN-rlang 
+Requires:         R-CRAN-rvest 
+Requires:         R-CRAN-scales 
+Requires:         R-CRAN-sf 
+Requires:         R-CRAN-tibble 
+Requires:         R-CRAN-tidyr 
+Requires:         R-CRAN-plotly 
+Requires:         R-CRAN-spdep 
+Requires:         R-CRAN-knitr 
+
+%description
+Facilitates the retrieval and analysis of financial data related to public
+works in Italy, focusing on soil defense investments. It extracts data
+from 'OpenCoesione', 'OpenBDAP', and the 'ReNDiS' database, eliminating
+the need for direct access to these platforms. The package boasts a
+user-friendly design, featuring real time updates and a set of functions
+tailored for data retrieval and visualization. See the webpages for
+further information <http://www.rendis.isprambiente.it/rendisweb/>,
+<https://opencoesione.gov.it/en/>, and
+<https://bdap-opendata.rgs.mef.gov.it/>.
+
+%prep
+%setup -q -c -n %{packname}
+
+# fix end of executable files
+find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
+# prevent binary stripping
+[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
+  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
+[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
+  sed -i 's@-g0@@g' {} \; || true
+# don't allow local prefix in executable scripts
+find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;
+
+%build
+
+%install
+
+mkdir -p %{buildroot}%{rlibdir}
+%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
+test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
+rm -f %{buildroot}%{rlibdir}/R.css
+# remove buildroot from installed files
+find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;
+
+%files
+%{rlibdir}/%{packname}
diff --git a/specs/R-CRAN-QuadratiK.spec b/specs/R-CRAN-QuadratiK.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  QuadratiK
-%global packver   1.1.1
+%global packver   1.1.2
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          1.1.1
+Version:          1.1.2
 Release:          1%{?dist}%{?buildtag}
 Summary:          Collection of Methods Constructed using Kernel-Based Quadratic Distances
 
@@ -16,55 +16,47 @@ Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz
 
 BuildRequires:    R-devel >= 3.5.0
 Requires:         R-core >= 3.5.0
-BuildRequires:    R-CRAN-cluster 
-BuildRequires:    R-CRAN-clusterRepro 
+BuildRequires:    R-parallel 
 BuildRequires:    R-CRAN-doParallel 
 BuildRequires:    R-CRAN-foreach 
-BuildRequires:    R-CRAN-ggpp 
 BuildRequires:    R-CRAN-ggplot2 
 BuildRequires:    R-CRAN-ggpubr 
-BuildRequires:    R-CRAN-mclust 
 BuildRequires:    R-methods 
 BuildRequires:    R-CRAN-moments 
-BuildRequires:    R-CRAN-movMF 
 BuildRequires:    R-CRAN-mvtnorm 
 BuildRequires:    R-CRAN-Rcpp 
 BuildRequires:    R-CRAN-RcppEigen 
-BuildRequires:    R-CRAN-rgl 
 BuildRequires:    R-CRAN-rlecuyer 
-BuildRequires:    R-CRAN-rrcov 
 BuildRequires:    R-CRAN-sn 
 BuildRequires:    R-stats 
-BuildRequires:    R-CRAN-Tinflex 
-Requires:         R-CRAN-cluster 
-Requires:         R-CRAN-clusterRepro 
+BuildRequires:    R-CRAN-rrcov 
+BuildRequires:    R-CRAN-scatterplot3d 
+Requires:         R-parallel 
 Requires:         R-CRAN-doParallel 
 Requires:         R-CRAN-foreach 
-Requires:         R-CRAN-ggpp 
 Requires:         R-CRAN-ggplot2 
 Requires:         R-CRAN-ggpubr 
-Requires:         R-CRAN-mclust 
 Requires:         R-methods 
 Requires:         R-CRAN-moments 
-Requires:         R-CRAN-movMF 
 Requires:         R-CRAN-mvtnorm 
 Requires:         R-CRAN-Rcpp 
 Requires:         R-CRAN-RcppEigen 
-Requires:         R-CRAN-rgl 
 Requires:         R-CRAN-rlecuyer 
-Requires:         R-CRAN-rrcov 
 Requires:         R-CRAN-sn 
 Requires:         R-stats 
-Requires:         R-CRAN-Tinflex 
+Requires:         R-CRAN-rrcov 
+Requires:         R-CRAN-scatterplot3d 
 
 %description
 It includes test for multivariate normality, test for uniformity on the
-Sphere, non-parametric two- and k-sample tests, random generation of
-points from the Poisson kernel-based density and clustering algorithm for
-spherical data. For more information see Saraceno, G., Markatou, M.,
-Mukhopadhyay, R., Golzy, M. (2024) <doi:10.48550/arXiv.2402.02290>, Ding,
-Y., Markatou, M., Saraceno, G. (2023) <doi:10.5705/ss.202022.0347>, and
-Golzy, M., Markatou, M. (2020) <doi:10.1080/10618600.2020.1740713>.
+d-dimensional Sphere, non-parametric two- and k-sample tests, random
+generation of points from the Poisson kernel-based density and clustering
+algorithm for spherical data. For more information see Saraceno G.,
+Markatou M., Mukhopadhyay R. and Golzy M. (2024)
+<doi:10.48550/arXiv.2402.02290> Markatou, M. and Saraceno, G. (2024)
+<doi:10.48550/arXiv.2407.16374>, Ding, Y., Markatou, M. and Saraceno, G.
+(2023) <doi:10.5705/ss.202022.0347>, and Golzy, M. and Markatou, M. (2020)
+<doi:10.1080/10618600.2020.1740713>.
 
 %prep
 %setup -q -c -n %{packname}

diff --git a/specs/R-CRAN-RcmdrPlugin.DoE.spec b/specs/R-CRAN-RcmdrPlugin.DoE.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  RcmdrPlugin.DoE
-%global packver   0.12-5
+%global packver   0.12-6
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          0.12.5
+Version:          0.12.6
 Release:          1%{?dist}%{?buildtag}
 Summary:          R Commander Plugin for (Industrial) Design of Experiments
 

diff --git a/specs/R-CRAN-TDApplied.spec b/specs/R-CRAN-TDApplied.spec
@@ -1,11 +1,11 @@
 %global __brp_check_rpaths %{nil}
 %global __requires_exclude ^libmpi
 %global packname  TDApplied
-%global packver   3.0.3
+%global packver   3.0.4
 %global rlibdir   /usr/local/lib/R/library
 
 Name:             R-CRAN-%{packname}
-Version:          3.0.3
+Version:          3.0.4
 Release:          1%{?dist}%{?buildtag}
 Summary:          Machine Learning and Inference for Topological Data Analysis