fix: Add MigrationModuleManager to handle migration of upgrade module before other modules (backport #16583)

[mergify]

This is an automatic backport of pull request #16583 done by Mergify.
Cherry-pick of 0c1f6fc has failed:

On branch mergify/bp/release/v0.47.x/pr-16583
Your branch is up to date with 'origin/release/v0.47.x'.

You are currently cherry-picking commit 0c1f6fc16.
  (fix conflicts and run "git cherry-pick --continue")
  (use "git cherry-pick --skip" to skip this patch)
  (use "git cherry-pick --abort" to cancel the cherry-pick operation)

Changes to be committed:
	modified:   runtime/builder.go
	modified:   simapp/app.go
	modified:   x/upgrade/module.go

Unmerged paths:
  (use "git add <file>..." to mark resolution)
	both modified:   CHANGELOG.md
	both modified:   UPGRADING.md
	both modified:   baseapp/baseapp.go
	both modified:   docs/docs/building-modules/01-module-manager.md
	both modified:   docs/docs/core/00-baseapp.md
	both modified:   testutil/mock/types_mock_appmodule.go
	both modified:   types/module/module.go
	both modified:   types/module/module_test.go

To fix up this pull request, you can check it out locally. See documentation: https://docs.github.com/en/github/collaborating-with-pull-requests/reviewing-changes-in-pull-requests/checking-out-pull-requests-locally

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[yihuang]

breaking change