Bump mamba-org/setup-micromamba from 1 to 2 (#178) #480
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| name: Tests | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| schedule: | |
| - cron: '0 0 * * 0' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| - uses: pre-commit/[email protected] | |
| test: | |
| needs: linting | |
| name: ${{ matrix.os }}, ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| python-version: ['3.10', '3.11', '3.12'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Conda | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| init-shell: bash | |
| environment-name: test | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| geopandas | |
| numpy<2 | |
| netcdf4 | |
| odc-geo | |
| pandoc | |
| rasterio | |
| rioxarray | |
| scipy | |
| xarray | |
| - name: Install Env | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -m pip install -r requirements/dev.txt | |
| micromamba run -n test python -m pip install -e . | |
| - name: Check and Log Environment | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -V | |
| micromamba run -n test python -c "import geocube; geocube.show_versions();" | |
| micromamba info | |
| - name: Pylint | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -m pylint geocube | |
| - name: mypy | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -m mypy geocube/ | |
| - name: Test | |
| shell: bash | |
| run: | | |
| micromamba run -n test pytest --cov-report term-missing --cov=geocube --cov-report xml | |
| - name: Test Build docs | |
| shell: bash | |
| if: contains(matrix.os, 'ubuntu') | |
| run: | | |
| micromamba run -n test sphinx-build -b html docs/ docs/_build/ | |
| - uses: codecov/codecov-action@v4 | |
| test_latest: | |
| needs: linting | |
| name: Test latest dependencies | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Conda | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| init-shell: bash | |
| environment-name: test | |
| create-args: >- | |
| python=3.10 | |
| proj | |
| libgdal | |
| cython | |
| netcdf4 | |
| - name: Install Env | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -m pip install \ | |
| --index-url https://pypi.anaconda.org/scientific-python-nightly-wheels/simple \ | |
| --no-deps --pre --upgrade \ | |
| numpy \ | |
| pandas \ | |
| scipy; | |
| micromamba run -n test python -m pip install --upgrade \ | |
| git+https://github.com/geopandas/pyogrio.git@main \ | |
| git+https://github.com/rasterio/rasterio.git@main \ | |
| git+https://github.com/pyproj4/pyproj.git@main \ | |
| git+https://github.com/geopandas/geopandas.git@main \ | |
| git+https://github.com/pydata/xarray.git@main \ | |
| git+https://github.com/opendatacube/odc-geo.git@develop \ | |
| git+https://github.com/corteva/rioxarray.git@master; | |
| micromamba run -n test python -m pip install -e .[all] | |
| micromamba run -n test python -m pip install -r requirements/test.txt | |
| - name: Check and Log Environment | |
| shell: bash | |
| run: | | |
| micromamba run -n test python -V | |
| micromamba run -n test python -c "import geocube; geocube.show_versions();" | |
| micromamba info | |
| - name: Test | |
| shell: bash | |
| run: | | |
| micromamba run -n test pytest --cov-report term-missing --cov=geocube --cov-report xml |