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Merge pull request #102 from compomics/fix/from-iter #364

Merge pull request #102 from compomics/fix/from-iter

Merge pull request #102 from compomics/fix/from-iter #364

Workflow file for this run

name: Test
on:
push:
branches:
- main
pull_request:
workflow_dispatch:
jobs:
linting-and-coverage:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.8
uses: actions/setup-python@v5
with:
python-version: "3.8"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install ruff
- name: Check with Ruff
run: ruff check --output-format=github .
- name: Install package and its dependencies
run: pip install --editable .[dev,idxml]
- name: Test with pytest and codecov
run: |
pytest --cov=psm_utils --cov-report=xml tests/
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: ./coverage.xml
flags: unittests
name: codecov-umbrella
fail_ci_if_error: false
test-platforms:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install package and its dependencies
run: |
python -m pip install --upgrade pip
pip install .[dev,idxml]
- name: Test imports
run: python -c "import psm_utils"
- name: Test with pytest
run: |
pytest