Skip to content
View cimendes's full-sized avatar

Organizations

@B-UMMI @bioconda @LDSSA @assemblerflow @pha4ge @theiagen @gambit-suite

Block or report cimendes

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
cimendes/README.md

Pinned Loading

  1. B-UMMI/LMAS B-UMMI/LMAS Public

    LMAS - Last (Meta)Genomic Assembler Standing

    Python 10 2

  2. B-UMMI/DEN-IM B-UMMI/DEN-IM Public

    Dengue virus genotyping from shotgun and targeted metagenomics​ - A nextflow pipeline

    Python 7 5

  3. assemblerflow/flowcraft assemblerflow/flowcraft Public

    FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. 🐳📦

    Python 241 44

  4. B-UMMI/INNUca B-UMMI/INNUca Public

    INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

    Python 13 7

  5. pha4ge/hAMRonization pha4ge/hAMRonization Public

    Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

    Python 144 30

  6. pha4ge/SARS-CoV-2-Contextual-Data-Specification pha4ge/SARS-CoV-2-Contextual-Data-Specification Public

    Collection template and associated materials for SARS-CoV-2 metadata

    35 9