Code

Add Conversion scripts#95

Code

Merged

CodyCBakerPhD merged 22 commits intomaincatalystneuro/datta-lab-to-nwb:mainfrom conversioncatalystneuro/datta-lab-to-nwb:conversionCopy head branch name to clipboardDec 6, 2023

+374-23

Commits

Commits on Nov 27, 2023

• added simple script to iterate through raw data and check for a uuid

  pauladkisson

  committed
  3203642

Commits on Nov 28, 2023

• fixed bugs with dataset conversion script

  pauladkisson

  committed
  5232bb9

• downgrade dandi to fix conflict

  pauladkisson

  committed
  0449d81

• added skip sessions to catch problematic sessions

  pauladkisson

  committed
  658f6fe

Commits on Nov 29, 2023

• added the rest of the skips

  pauladkisson

  committed
  5827148

Commits on Nov 30, 2023

• added checks for processed data

  pauladkisson

  committed
  1ab5b96

• refactored missing uuids to show all at the end

  pauladkisson

  committed
  edd0f2c

• save mising uuids to yaml

  pauladkisson

  committed
  c3b846a

• assert no misclasses

  pauladkisson

  committed
  93da2a7

• check missing and extra uuids separately

  pauladkisson

  committed
  66392ca

• add more detail to missing uuids

  pauladkisson

  committed
  46a50e3

Commits on Dec 1, 2023

• refactored dataset conversion script to actually convert data

  pauladkisson

  committed
  6603a38

• made sure skipped sessions arent counted for num_sessions

  pauladkisson

  committed
  53aa7cc

• fixed import

  pauladkisson

  committed
  61e3436

• fixed requirements

  pauladkisson

  committed
  62f9cba

• removed vestigial uuid code

  pauladkisson

  committed
  dcf722c

• added Us for missing subjects in the sex_map

  pauladkisson

  committed
  9842a3d

• removed example uuids to extract all metadata

  pauladkisson

  committed
  10d87d8

• delete output directory each run to keep things clean

  pauladkisson

  committed
  62509e2

• _aggregate_results_arhmm_photometry_excitation_pulsed_01 actually shows up in the reinforcement dataframe not photometry

  pauladkisson

  committed
  99d61b2

• fixed bug with alignment for photometry only sessions

  pauladkisson

  committed
  c17c549

Commits on Dec 6, 2023

• debugs

  CodyCBakerPhD

  committed
  3a76dcf