Updated Repo for Compatibility w/ DANDI

src/datta_lab_to_nwb/markowitz_gillis_nature_2023/markowitz_gillis_nature_2023_metadata.yaml

@@ -23,13 +23,15 @@ NWBFile:
     - Datta, Sandeep Robert
 Subject:
   species: Mus musculus
+  age: P6W/ # TODO: find DOBs for each animal
+  date_of_birth: 2000-01-01T00:00:00+00:00 # Dummy dob for dandi
 Behavior:
   Position:
     reference_frame: TBD
   CompassDirection:
     reference_frame: TBD
   Syllable:
-    syllable_id2name: # Mapping from syllable ID (unique) --> syllable name (not unique) [See Extended Data Fig. 2c]
+    sorted_pseudoindex2name: # Mapping from syllable pseudo-index (sorted by usage, starting at 1) --> syllable name (not unique) [See Extended Data Fig. 2c]
       4: Pause
       10: Reared sniff
       33: Pause, turn left
@@ -67,3 +69,121 @@ Behavior:
       9: Reared sniff
       27: Pause
       14: Body lick
+    id2sorted_index: # Mapping from syllable id --> syllable index (sorted by usage) [See syllable_stats_offline.toml]
+      74: 0
+      20: 1
+      22: 2
+      17: 3
+      86: 4
+      8: 5
+      12: 6
+      91: 7
+      27: 8
+      64: 9
+      95: 10
+      71: 11
+      19: 12
+      44: 13
+      39: 14
+      25: 15
+      65: 16
+      58: 17
+      41: 18
+      47: 19
+      53: 20
+      57: 21
+      94: 22
+      76: 23
+      35: 24
+      92: 25
+      72: 26
+      7: 27
+      5: 28
+      77: 29
+      67: 30
+      33: 31
+      66: 32
+      42: 33
+      15: 34
+      30: 35
+      56: 36
+      11: 37
+      45: 38
+      13: 39
+      73: 40
+      62: 41
+      31: 42
+      59: 43
+      10: 44
+      75: 45
+      4: 46
+      54: 47
+      43: 48
+      26: 49
+      60: 50
+      85: 51
+      29: 52
+      80: 53
+      68: 54
+      38: 55
+      63: 56
+      -5: 57
+    sorted_index2id:
+      0: 74
+      1: 20
+      2: 22
+      3: 17
+      4: 86
+      5: 8
+      6: 12
+      7: 91
+      8: 27
+      9: 64
+      10: 95
+      11: 71
+      12: 19
+      13: 44
+      14: 39
+      15: 25
+      16: 65
+      17: 58
+      18: 41
+      19: 47
+      20: 53
+      21: 57
+      22: 94
+      23: 76
+      24: 35
+      25: 92
+      26: 72
+      27: 7
+      28: 5
+      29: 77
+      30: 67
+      31: 33
+      32: 66
+      33: 42
+      34: 15
+      35: 30
+      36: 56
+      37: 11
+      38: 45
+      39: 13
+      40: 73
+      41: 62
+      42: 31
+      43: 59
+      44: 10
+      45: 75
+      46: 4
+      47: 54
+      48: 43
+      49: 26
+      50: 60
+      51: 85
+      52: 29
+      53: 80
+      54: 68
+      55: 38
+      56: 63
+      57: -5