fixed bug with alignment for photometry only sessions

catalystneuro · Dec 1, 2023 · c17c549 · c17c549
1 parent 99d61b2
commit c17c549
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/src/datta_lab_to_nwb/markowitz_gillis_nature_2023/convert_session.py b/src/datta_lab_to_nwb/markowitz_gillis_nature_2023/convert_session.py
@@ -118,7 +118,8 @@ def session_to_nwb(
         source_data["MoseqExtract"]["alignment_path"] = str(alignment_path)
         source_data["BehavioralSyllable"]["alignment_path"] = str(alignment_path)
         source_data["DepthVideo"]["alignment_path"] = str(alignment_path)
-        source_data["Optogenetic"]["alignment_path"] = str(alignment_path)
+        if "reinforcement" in session_metadata.keys():
+            source_data["Optogenetic"]["alignment_path"] = str(alignment_path)
     source_data["BehavioralSyllable"]["file_path"] = str(behavioral_syllable_path)
     if experiment_type == "velocity-modulation":
         conversion_options["BehavioralSyllable"] = dict(velocity_modulation=True)