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port interfae and extractor from neurocnv and roiextractors
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alessandratrapani committed Oct 22, 2024
1 parent e175232 commit 0e83323
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Showing 3 changed files with 4 additions and 9 deletions.
3 changes: 2 additions & 1 deletion src/cai_lab_to_nwb/zaki_2024/__init__.py
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from .implant_interface import ImplantInterface
from .behaviorinterface import FreezingBehaviorInterface
from .sleepinterface import SleepBehaviorInterface
from .sleepinterface import SleepBehaviorInterface
from .minian_segmentation_interface import MinianSegmentationInterface
3 changes: 0 additions & 3 deletions src/cai_lab_to_nwb/zaki_2024/behaviorinterface.py
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from pydantic import FilePath
from typing import Optional

from explore_segmentation_data import unit_ids


class FreezingBehaviorInterface(BaseDataInterface):
"""Adds intervals of freezing behavior interface."""

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7 changes: 2 additions & 5 deletions src/cai_lab_to_nwb/zaki_2024/zaki_2024_nwbconverter.py
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"""Primary NWBConverter class for this dataset."""
from neuroconv import NWBConverter
from neuroconv.datainterfaces import (
MinianSegmentationInterface,
)


# from neuroconv.datainterfaces import MinianSegmentationInterface
from minian_segmentation_interface import MinianSegmentationInterface

class Zaki2024NWBConverter(NWBConverter):
"""Primary conversion class for my extracellular electrophysiology dataset."""
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