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rcurty authored Feb 5, 2024
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**The project example folder is a simplified version of the original project available at: https://osf.io/6mvq7.**

Our example uses an adapted version of the data paper: Nitsch, F. J., Sellitto, M., & Kalenscher, T. (2021). The effects of acute and chronic stress on choice consistency. Psychoneuroendocrinology, 131, 105289. https://doi.org/10.1016/j.psyneuen.2021.105289. The data paper along with its underlying data publicly available at: https://osf.io/6mvq7 were adapted and used for educational purposes with the authors' permission.
Our example uses an adapted version of the data paper: Nitsch, F. J., Sellitto, M., & Kalenscher, T. (2021). The effects of acute and chronic stress on choice consistency. Psychoneuroendocrinology, 131, 105289. https://doi.org/10.1016/j.psyneuen.2021.105289. The data paper and its underlying data publicly available at [https://osf.io/6mvq7](https://osf.io/6mvq7) were adapted and used for educational purposes with the authors' permission.

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## README

This directory contains the data and analysis scripts required to computationally reproduce some of the results and plots reported
in "Nitsch, Sellitto & Kalenscher (2021). The effects of acute and chronic stress on choice consistency." Psychoneuroendocrinology that are used in this workshop.
in "Nitsch, Sellitto & Kalenscher (2021). The effects of acute and chronic stress on choice consistency." Psychoneuroendocrinology is used in this workshop.

All provided code is written in R (R version 4.0.0 (2020-04-24) -- "Arbor Day") and should work with more recent versions.
It requires the following packages to run the analysis code:
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To repeat the analyses,
1. Open the RStudio Project file.
2. Open and run analyses scripts (in order)
2. Open and run analysis scripts (in order)

Graphic output is saved to output/plots
Data output is saved to output/data
Analysis results are saved in environment / printed to console
Analysis results are saved in the environment / printed to the console
Paper output is saved to paper/output
paper/bin contains external files/code necessary for the proper formatting of the R Markdown paper output.

**Note:** The `renv` branch has the same content as the `main` branch with the addition of having [renv](https://rstudio.github.io/renv/articles/renv.html) enabled for better reproducibility.

Please see citation.md for instructions on how to cite this workshop.

Please see License.md for instructions on how to re-use this material.
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* Greg Janee (gjanee)
* Julien Brun (brunj7)
* kristi Liu (kristi-sara)

The `renv` branch has the same content as the `main` branch with the addition of having [renv](https://rstudio.github.io/renv/articles/renv.html) enabled for better reproducibility.

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