Skip to content

Commit

Permalink
Update generated documentation for version 0.0.1
Browse files Browse the repository at this point in the history
  • Loading branch information
caroott committed May 21, 2019
1 parent 62ef679 commit 89a3c28
Show file tree
Hide file tree
Showing 3 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions DilutionExperiment.html
Original file line number Diff line number Diff line change
Expand Up @@ -40,11 +40,11 @@ <h2><a name="Counting-results" class="anchor" href="#Counting-results">Counting
For that i took a cell suspension with ~1.35 * 10^7 cells and set up a serial dilution by always halving the amount up to 1:16.
I took 3 measurements for each timepoint. One measurement for both, the Cell Counter and the manual counting consists of three seperate images.</p>
<p>Here you can see the result of those measurements:</p>
<div id="21560653-01f3-47f5-9349-28e4e8b5aa04" style="width: 700px; height: 500px;"><!-- Plotly chart will be drawn inside this DIV --></div>
<div id="6a27e14f-6185-4a1b-b028-6fc93e9a976d" style="width: 700px; height: 500px;"><!-- Plotly chart will be drawn inside this DIV --></div>
<script>
var data = [{"type":"scatter","x":["1:1","1:2","1:4","1:8","1:16"],"y":[13500000.0,7500000.0,3722222.0,1527778.0,1027778.0],"mode":"lines","marker":{},"error_y":{"array":[180021.0,245327.0,501541.0,171234.0,306816.0]},"name":"Cell Counter"},{"type":"scatter","x":["1:1","1:2","1:4","1:8","1:16"],"y":[14000000.0,6638889.0,3222222.0,1611111.0,944444.0],"mode":"lines","marker":{},"error_y":{"array":[784691.0,519675.0,306816.0,238953.0,398686.0]},"name":"Manual counting"},{"type":"scatter","x":["1:1","1:2","1:4","1:8","1:16"],"y":[13113333.0,7283333.0,3813000.0,1968333.0,1006067.0],"mode":"lines","marker":{},"error_y":{"array":[744058.0,59668.0,46755.0,18553.0,15179.0]},"name":"Coulter Counter"}];
var layout = {"xaxis":{"title":"Dilution","tickmode":"auto","ticks":"inside","mirror":"all","showline":true,"showgrid":false,"zeroline":false,"titlefont":{"family":"Arial","size":20.0},"tickfont":{"family":"Arial","size":20.0}},"yaxis":{"title":"Cells/ml","tickmode":"auto","ticks":"inside","mirror":"all","showline":true,"showgrid":false,"zeroline":false,"titlefont":{"family":"Arial","size":20.0},"tickfont":{"family":"Arial","size":20.0}},"width":900.0,"height":900.0};
Plotly.newPlot('21560653-01f3-47f5-9349-28e4e8b5aa04', data, layout);
Plotly.newPlot('6a27e14f-6185-4a1b-b028-6fc93e9a976d', data, layout);
</script>
</br>
</br>
Expand Down
2 changes: 1 addition & 1 deletion index.html
Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@ <h2><a name="Example" class="anchor" href="#Example">Example</a></h2>
</html>
</dl>
<p>A more thorough view of the project can be found <a href="DilutionExperiment.html">here</a> with a practical demonstration.
For more explanations of the functions you can go <a href="FunctionExplanation.html">there</a></p>
For more explanations of the functions you can go <a href="FunctionExplanation.html">there</a>.</p>
<h2><a name="Samples-amp-documentation" class="anchor" href="#Samples-amp-documentation">Samples &amp; documentation</a></h2>
<p>The library comes with comprehensible documentation.
It can include tutorials automatically generated from <code>*.fsx</code> files in <a href="https://github.com/fsprojects/CellCounter/tree/master/docs/content">the content folder</a>.
Expand Down
2 changes: 1 addition & 1 deletion reference/counterfunctions-filter.html
Original file line number Diff line number Diff line change
Expand Up @@ -158,7 +158,7 @@ <h3>Functions and values</h3>
<img src="../content/img/github-blue.png" class="hover" />
</a>
<p>Calculates the dimension in pixels for a square in an improved Neubauer counting chamber
cameraPixelSize is the pixel size of the camera used in �m. For a pixel size of 5x5 for example, you put in a 5.
cameraPixelSize is the pixel size of the camera used in microns. For a pixel size of 5x5 for example, you put in a 5.
binning represents the binning used for the image. For a binning of 2x2
you put in a 2, for a binning of 4x4 a 4 and so on. Magnification is the magnification of the objective,
cameraMount the magnification of the camera mount used.</p>
Expand Down

0 comments on commit 89a3c28

Please sign in to comment.