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Protocol Correction format of copynumber.caveman.csv

Keiran Raine edited this page Jul 5, 2020 · 1 revision

The published protocols paper has an error in the described format of the *.copynumber.caveman.csv file.

The correct format is:

  1. Segment number
  2. Chromosome
  3. Start position (origin‐1)
  4. End position (origin‐1)
  5. Major Total copy number—normal
  6. Minor copy number—normal
  7. Major Total copy number—tumour
  8. Minor copy number—tumour

Thanks to @Tim0thy1 and @wanhui5867 for highlighting this inaccuracy.