feat: isolate test suite #134
Workflow file for this run
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name: Test steps | |
on: | |
pull_request: {} | |
push: | |
branches: [ main ] | |
jobs: | |
python_run_scripts: | |
strategy: | |
fail-fast: false | |
matrix: | |
version: ['3.11'] | |
runs-on: ubuntu-latest | |
steps: | |
- name: install mpi | |
run: sudo apt update && sudo apt-get install openmpi-bin openmpi-doc libopenmpi-dev | |
- uses: actions/checkout@v3 | |
with: | |
lfs: true | |
- name: setup python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.version }} # install the python version needed | |
cache: "pip" | |
- name: install icesat2-tracks using pip | |
run: pip install . | |
- name: install pytest | |
run: pip install pytest pytest-xdist pytest-sugar pytest-durations | |
- name: Run tests | |
run: pytest --capture=sys --verbose --showlocals --tb=long --numprocesses=auto tests/test_steps.py | |
- name: second step make_spectra | |
run: python src/icesat2_tracks/analysis_db/B02_make_spectra_gFT.py SH_20190502_05180312 SH_testSLsinglefile2 True | |
- name: third step plot_spectra | |
run: python src/icesat2_tracks/analysis_db/B03_plot_spectra_ov.py SH_20190502_05180312 SH_testSLsinglefile2 True | |
- name: fourth step IOWAGA thredds | |
run: python src/icesat2_tracks/analysis_db/A02c_IOWAGA_thredds_prior.py SH_20190502_05180312 SH_testSLsinglefile2 True | |
- name: Fifth step B04_angle | |
run: python src/icesat2_tracks/analysis_db/B04_angle.py SH_20190502_05180312 SH_testSLsinglefile2 True |