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feat: isolate test suite #134

feat: isolate test suite

feat: isolate test suite #134

name: Test steps
on:
pull_request: {}
push:
branches: [ main ]
jobs:
python_run_scripts:
strategy:
fail-fast: false
matrix:
version: ['3.11']
runs-on: ubuntu-latest
steps:
- name: install mpi
run: sudo apt update && sudo apt-get install openmpi-bin openmpi-doc libopenmpi-dev
- uses: actions/checkout@v3
with:
lfs: true
- name: setup python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.version }} # install the python version needed
cache: "pip"
- name: install icesat2-tracks using pip
run: pip install .
- name: install pytest
run: pip install pytest pytest-xdist pytest-sugar pytest-durations
- name: Run tests
run: pytest --capture=sys --verbose --showlocals --tb=long --numprocesses=auto tests/test_steps.py
- name: second step make_spectra
run: python src/icesat2_tracks/analysis_db/B02_make_spectra_gFT.py SH_20190502_05180312 SH_testSLsinglefile2 True
- name: third step plot_spectra
run: python src/icesat2_tracks/analysis_db/B03_plot_spectra_ov.py SH_20190502_05180312 SH_testSLsinglefile2 True
- name: fourth step IOWAGA thredds
run: python src/icesat2_tracks/analysis_db/A02c_IOWAGA_thredds_prior.py SH_20190502_05180312 SH_testSLsinglefile2 True
- name: Fifth step B04_angle
run: python src/icesat2_tracks/analysis_db/B04_angle.py SH_20190502_05180312 SH_testSLsinglefile2 True