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explicit conda channels in conda build command (#617)
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* explicitly set conda channels for travis

* explicitly add channels to conda build
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tomkinsc authored Mar 8, 2017
1 parent 44021d7 commit c0d95ab
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion travis/deploy.sh
Original file line number Diff line number Diff line change
Expand Up @@ -42,7 +42,7 @@ if [ ! -z "$ANACONDA_TOKEN" ]; then
echo "Running $SCRIPTPATH/package-conda.sh"
# Render recipe from template and dependency files, setting the tag as the current version
python packaging/conda-recipe/render-recipe.py "$PKG_VERSION" --build-reqs requirements-conda.txt --run-reqs requirements-conda.txt --py3-run-reqs requirements-py3.txt --py2-run-reqs requirements-py2.txt && \
conda build --python "$TRAVIS_PYTHON_VERSION" --token "$ANACONDA_TOKEN" packaging/conda-recipe/viral-ngs && \
conda build -c broad-viral -c r -c bioconda -c conda-forge -c defaults --python "$TRAVIS_PYTHON_VERSION" --token "$ANACONDA_TOKEN" packaging/conda-recipe/viral-ngs && \
./travis/trigger-tests-in-other-repo.sh
# check the exit code of conda build, and if successful,
# trigger the viral-ngs-deploy repository to test/build the docker container
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