Use vijayy's funlib.eval

brianreicher · Sep 12, 2023 · 462a881 · 462a881
1 parent 9bab8b1
commit 462a881
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Showing 4 changed files with 4 additions and 7 deletions.
diff --git a/.github/workflows/tests.yaml b/.github/workflows/tests.yaml
@@ -26,11 +26,10 @@ jobs:
         uses: conda-incubator/setup-miniconda@v2
 
       - name: Install graph tools
-        run: bash graph.sh
+        run: conda install -c conda-forge -c ostrokach-forge -c pkgw-forge graph-tool
 
       - name: Install dependencies
         run: pip install -r dev_requirments.txt
 
-
       - name: Test with pytest
         run: pytest tests
diff --git a/dev_requirments.txt b/dev_requirments.txt
@@ -3,7 +3,7 @@ pymongo
 scikit-image
 daisy
 pytest
-Cython
+cython
 mwatershed@ git+https://github.com/pattonw/mwatershed
 funlib.geometry@ git+https://github.com/funkelab/funlib.geometry
 funlib.persistence@ git+https://github.com/funkelab/funlib.persistence

diff --git a/graph.sh b/graph.sh
diff --git a/setup.cfg b/setup.cfg
@@ -25,11 +25,12 @@ install_requires =
     scikit-image
     daisy
     zarr
+    cython
     mwatershed @ git+https://github.com/pattonw/mwatershed
     funlib.geometry @ git+https://github.com/funkelab/funlib.geometry
     funlib.persistence @ git+https://github.com/funkelab/funlib.persistence
     funlib.segment @ git+https://github.com/funkelab/funlib.segment
-    # fublib.evaluate @ git+https://github.com/funkelab/funlib.evaluate
+    fublib.evaluate @ git+https://github.com/yajivunev/funlib.evaluate.git
     gunpowder @ git+https://github.com/funkey/gunpowder
 
 [options.packages.find]