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Merge pull request #4 from brainglobe/last-min-improvements
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last min tweaks
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alessandrofelder authored Oct 7, 2024
2 parents 04d23f4 + df6817b commit 8ef8c7f
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4 changes: 2 additions & 2 deletions index.qmd
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## Schedule{.smaller}
::: {.incremental}
- Installing BrainGlobe (30 mins)
- Introduction to Image analysis with Napari
- Installing BrainGlobe and Napari (30 mins)
- Introduction to Image analysis with Napari (60 mins)
- Introduction to BrainGlobe (30 mins)
- Registering whole brain microscopy images with brainreg (30 mins)
- Segmenting structures in whole brain microscopy images with brainglobe-segmentation (30 mins)
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15 changes: 7 additions & 8 deletions slides/installation.qmd
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## Install napari and BrainGlobe

#### Silicon mac users
```bash
pip install brainglobe
conda install niftyreg
```


#### All other users
### Everyone
```{.bash}
conda create -n brainglobe-env python=3.12
conda activate brainglobe-env
pip install brainglobe
```

#### Silicon mac users (additionally)
```bash
conda install niftyreg
```

## Double-check installation {.smaller}
:::: {.columns}
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