Test on Python 3.11

.github/workflows/test_and_deploy.yml

@@ -18,20 +18,21 @@ jobs:
       - uses: brainglobe/actions/check_manifest@v1
 
   test:
-    needs: [linting, manifest]
     name: ${{ matrix.os }} py${{ matrix.python-version }}
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        # Run all supported Python versions on linux
-        python-version: ["3.8", "3.9", "3.10"]
-        os: [ubuntu-latest]
-        # Include one windows and macos run
+        # Run across a mixture of Python versions and operating systems
         include:
+        - os: ubuntu-latest
+          python-version: "3.11"
         - os: macos-latest
           python-version: "3.10"
         - os: windows-latest
-          python-version: "3.10"
+          python-version: "3.9"
+        - os: ubuntu-latest
+          python-version: "3.8"
+
 
     steps:
       # Setup pyqt libraries

.pre-commit-config.yaml

@@ -1,10 +1,10 @@
 repos:
     - repo: https://github.com/pycqa/isort
-      rev: 5.10.1
+      rev: 5.12.0
       hooks:
           - id: isort
     - repo: https://github.com/pre-commit/pre-commit-hooks
-      rev: v4.3.0
+      rev: v4.4.0
       hooks:
           - id: check-docstring-first
           - id: check-executables-have-shebangs
@@ -19,10 +19,10 @@ repos:
             # not inferfere with versioning
             exclude: setup.cfg
     - repo: https://github.com/pycqa/flake8
-      rev: 5.0.4
+      rev: 6.0.0
       hooks:
           - id: flake8
     - repo: https://github.com/psf/black
-      rev: 22.10.0
+      rev: 22.12.0
       hooks:
           - id: black

setup.py

@@ -16,7 +16,7 @@
     "magicgui",
     "numpy",
     "qtpy",
-    "skimage",
+    "scikit-image",
     "tifffile",
     "pooch>=1",  # For downloading sample data
 ]
@@ -63,6 +63,7 @@
         "Programming Language :: Python :: 3.8",
         "Programming Language :: Python :: 3.9",
         "Programming Language :: Python :: 3.10",
+        "Programming Language :: Python :: 3.11",
         "Operating System :: OS Independent",
     ],
     entry_points={

tox.ini

@@ -1,17 +1,20 @@
 # For more information about tox, see https://tox.readthedocs.io/en/latest/
 [tox]
-envlist = py{38,39}
+envlist = py{38,39,310,311}
 
 [gh-actions]
 python =
     3.8: py38
     3.9: py39
+    3.10: py310
+    3.11: py311
 
 [testenv]
 passenv =
     CI
     GITHUB_ACTIONS
-    DISPLAY XAUTHORITY
+    DISPLAY
+    XAUTHORITY
     NUMPY_EXPERIMENTAL_ARRAY_FUNCTION
     PYVISTA_OFF_SCREEN
 deps =