Update to py311 and remove cibuildwheel

.github/workflows/test_and_deploy.yml

@@ -27,13 +27,13 @@ jobs:
       matrix:
         # Run all supported Python versions on linux
         os: [ubuntu-latest]
-        python-version: ["3.8", "3.9", "3.10"]
+        python-version: ["3.9", "3.10", "3.11"]
         # Include one windows, one macos run
         include:
         - os: macos-latest
-          python-version: "3.9"
+          python-version: "3.11"
         - os: windows-latest
-          python-version: "3.9"
+          python-version: "3.11"
 
     steps:
       - name: Cache tensorflow model
@@ -64,10 +64,10 @@ jobs:
         with:
           repository: 'brainglobe/cellfinder'
 
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v3
         with:
-          python-version: "3.10"
+          python-version: "3.11"
 
       - name: Install test dependencies
         run: |

.github/workflows/test_include_guard.yaml

@@ -21,7 +21,7 @@ jobs:
       - name: Setup Python
         uses: actions/setup-python@v4
         with:
-          python-version: '3.10'
+          python-version: '3.11'
 
       - name: Install via pip
         run: python -m pip install -e .

.github/workflows/test_numba_off.yml

@@ -23,5 +23,5 @@ jobs:
           key: models-${{ hashFiles('~/.cellfinder/**') }}
       - uses: neuroinformatics-unit/actions/test@v2
         with:
-          python-version: "3.10"
+          python-version: "3.11"
           codecov-flags: "numba"

pyproject.toml

@@ -11,9 +11,9 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Operating System :: OS Independent",
     "Programming Language :: Python",
-    "Programming Language :: Python :: 3.8",
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
     "Topic :: Scientific/Engineering :: Image Recognition",
 ]
 requires-python = ">=3.8"
@@ -71,12 +71,6 @@ include-package-data = true
 
 [tool.setuptools_scm]
 
-[tool.cibuildwheel]
-build = "cp38-* cp39-* cp310-*"
-
-[tool.cibuildwheel.macos]
-archs = ["x86_64", "arm64"]
-
 [tool.pytest.ini_options]
 addopts = "--cov=cellfinder_core --cov-report=xml"
 filterwarnings = [
@@ -94,7 +88,7 @@ markers = [
 log_level = "WARNING"
 
 [tool.black]
-target-version = ['py38', 'py39', 'py310']
+target-version = ['py39', 'py310', 'py311']
 skip-string-normalization = false
 line-length = 79
 

tox.ini

@@ -1,13 +1,13 @@
 # For more information about tox, see https://tox.readthedocs.io/en/latest/
 [tox]
-envlist = py{38,39,310}
+envlist = py{39,310,311}
 isolated_build = true
 
 [gh-actions]
 python =
-    3.8: py38
     3.9: py39
     3.10: py310
+    3.11: py311
 
 [testenv]
 commands = python -m pytest -v --color=yes