Merge pull request #296 from brainglobe/asymmetric-cells

Fixed bug related to issue #293, amended tests to check in the future
brainglobe · Dec 8, 2023 · 9bdbecf · 9bdbecf
2 parents 7d00370 + a1c23fe
commit 9bdbecf
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diff --git a/brainrender/actors/points.py b/brainrender/actors/points.py
@@ -144,5 +144,5 @@ def __init__(
             .alpha([0, 0.9])
             .mode(1)
         )  # returns a vedo Volume
-        volume.mirror("z")
+
         Actor.__init__(self, volume, name=name, br_class="density")
diff --git a/tests/test_integration.py b/tests/test_integration.py
@@ -198,6 +198,13 @@ def test_cell_density(scene):
     check_bounds(points_bounds, root_bounds)
     check_bounds(points_density_bounds, root_bounds)
 
+    ids = points_density.mesh.isosurface().inside_points(
+        coordinates, return_ids=True
+    )
+
+    # Check that at least 75% of the points are inside the mesh
+    assert len(ids) >= 0.75 * len(coordinates)
+
 
 def test_gene_expression(scene):
     gene = "Gpr161"