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Move troubleshooting back to cellfinder
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willGraham01 committed Jan 2, 2024
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## Troubleshooting

```{toctree}
:maxdepth: 1
troubleshooting/index
troubleshooting/error-messages
troubleshooting/speed-up
```
Since `brainmapper` uses `cellfinder`, you may encounter issues when using the command-line tool that are [documented on the `cellfinder` page](../cellfinder/troubleshooting/index.md).
[Head there](../cellfinder/troubleshooting/index.md) for more information on some common issues and debugging tips.

## Notes

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10 changes: 8 additions & 2 deletions docs/source/documentation/cellfinder/index.md
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user-guide/training-strategy
```

If you are experiencing issues with `cellfinder`'s speed or configuration, you may want to take a look at the [troubleshooting guide for `brainmapper`](../brainglobe-workflows/brainmapper/troubleshooting/index.md).
`brainmapper` uses your `cellfinder` installation when it runs, and many of the problems you encounter with `cellfinder` will be solved in the same way as those for `brainmapper`.
## Troubleshooting

```{toctree}
:maxdepth: 1
troubleshooting/index
troubleshooting/error-messages
troubleshooting/speed-up
```

## Citing cellfinder

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