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Move analysis functionality of brainmapper into brainglobe-utils #73

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adamltyson opened this issue Jan 5, 2024 · 1 comment
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Move analysis functionality of brainmapper into brainglobe-utils #73

adamltyson opened this issue Jan 5, 2024 · 1 comment
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The idea of this repo is that the workflows are simple pipelines that stitch together existing BG tools. brainmapper has some extra functionality such as transforming detected cells to raw data space and generating heatmaps. These should be moved into brainglobe-utils to:

  • Simplify maintenance of this repo
  • Allow the code to be reused (we likely need lots of this in a napari plugin at some point)
  • Allow users to more easily use the functions in their own scripts
@adamltyson adamltyson added the enhancement New feature or request label Jan 5, 2024
@adamltyson adamltyson self-assigned this Jan 5, 2024
This was referenced Jan 5, 2024
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Now done with #74 & #76

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