Update dependency (imlib -> brainglobe-utils) (#29)

brainglobe · Jun 26, 2023 · 7c7f8d1 · 7c7f8d1
1 parent a14934a
commit 7c7f8d1
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 4 deletions.
diff --git a/imio/load.py b/imio/load.py
@@ -7,7 +7,10 @@
 import nrrd
 import numpy as np
 import tifffile
-from imlib.general.system import get_num_processes, get_sorted_file_paths
+from brainglobe_utils.general.system import (
+    get_num_processes,
+    get_sorted_file_paths,
+)
 from natsort import natsorted
 from skimage import transform
 from tqdm import tqdm

diff --git a/imio/utils.py b/imio/utils.py
@@ -1,7 +1,7 @@
 import logging
 
 import psutil
-from imlib.general.system import get_sorted_file_paths
+from brainglobe_utils.general.system import get_sorted_file_paths
 from scipy.ndimage import zoom
 
 import imio

diff --git a/pyproject.toml b/pyproject.toml
@@ -18,15 +18,14 @@ classifiers = [
 ]
 requires-python = ">=3.8"
 dependencies = [
-    "imlib",
+    "brainglobe-utils[slurmio]",
     "natsort",
     "nibabel",
     "nibabel >= 2.1.0",
     "numpy",
     "psutil",
     "pynrrd",
     "scikit-image",
-    "slurmio >= 0.0.5",
     "tifffile",
     "tqdm",
 ]