ci: fix ref path

boasvdp · Apr 26, 2024 · 3ac5625 · 3ac5625
1 parent 3d3a2c7
commit 3ac5625
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tests/test_e2e.sh b/tests/test_e2e.sh
@@ -25,7 +25,7 @@ python -m pip install .
 assembly_snptyper \
     --list_input "$TEST_DATA_DIR"/test_genomes.txt \
     --vcf data/M1UK.vcf \
-    --reference "$TEST_DATA_DIR"/MGAS5005.fa \
+    --reference data/MGAS5005.fa \
     -p 2 > "$TEST_DATA_DIR"/test_output.txt
 
 # Check the output