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bmi203-2023

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  1. minimal-viable-package minimal-viable-package Public

    Demonstrate how to structure a project, build Python packages, unit testing, GitHub Actions, Read the Docs (RTD), package managers, distributions, containers, and high performance computing (HPC).

    Python 4 7

  2. hw4-prim-mst hw4-prim-mst Public

    Implement Prim's algorithm to construct a minimum spanning tree.

    Python 2 16

  3. HW2-BFS HW2-BFS Public

    Forked from BMI203-2022/project2

    HW2 BFS

    Python 20

  4. HW1-FAST-AQ-Parser HW1-FAST-AQ-Parser Public

    Building a FAST[AQ] Parser + Building a DNA -> RNA Transcriber

    Python 21

  5. HW1-FAST-AQ-Parser-Reference HW1-FAST-AQ-Parser-Reference Public

    Python

  6. hw3-clustering hw3-clustering Public

    Python 36

Repositories

Showing 10 of 10 repositories
  • final-nn Public

    Implement a generic neural network class and use it for autoencoding and classifying.

    bmi203-2023/final-nn’s past year of commit activity
    Python 0 MIT 35 0 0 Updated Mar 2, 2023
  • hw7-regression Public

    Implement a logistic regression classifier using gradient descent.

    bmi203-2023/hw7-regression’s past year of commit activity
    Python 0 MIT 15 0 0 Updated Mar 1, 2023
  • minimal-viable-package Public

    Demonstrate how to structure a project, build Python packages, unit testing, GitHub Actions, Read the Docs (RTD), package managers, distributions, containers, and high performance computing (HPC).

    bmi203-2023/minimal-viable-package’s past year of commit activity
    Python 4 7 0 0 Updated Feb 22, 2023
  • hw6-hmm-viterbi Public

    Implementation of the Viterbi algorithm, a dynamic program that is a common decoder for Hidden Markov Models (HMMs).

    bmi203-2023/hw6-hmm-viterbi’s past year of commit activity
    Python 0 14 0 0 Updated Feb 18, 2023
  • HW5-NW Public Forked from cjku97/project4

    Project 5: Needleman-Wunsch Global Alignment

    bmi203-2023/HW5-NW’s past year of commit activity
    Python 0 36 0 0 Updated Feb 6, 2023
  • hw4-prim-mst Public

    Implement Prim's algorithm to construct a minimum spanning tree.

    bmi203-2023/hw4-prim-mst’s past year of commit activity
    Python 2 MIT 16 0 0 Updated Jan 30, 2023
  • hw3-clustering Public
    bmi203-2023/hw3-clustering’s past year of commit activity
    Python 0 MIT 36 0 0 Updated Jan 23, 2023
  • HW2-BFS Public Forked from BMI203-2022/project2

    HW2 BFS

    bmi203-2023/HW2-BFS’s past year of commit activity
    Python 0 MIT 58 0 0 Updated Jan 22, 2023
  • HW1-FAST-AQ-Parser Public

    Building a FAST[AQ] Parser + Building a DNA -> RNA Transcriber

    bmi203-2023/HW1-FAST-AQ-Parser’s past year of commit activity
    Python 0 MIT 21 0 0 Updated Jan 13, 2023
  • HW1-FAST-AQ-Parser-Reference Public
    bmi203-2023/HW1-FAST-AQ-Parser-Reference’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 12, 2023

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